Vibrio cholerae O49 1154-74: VAA049_2698
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Entry
VAA049_2698 CDS
T03828
Symbol
dnaX
Name
(GenBank) DNA polymerase III, subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
vcx
Vibrio cholerae O49 1154-74
Pathway
vcx03030
DNA replication
vcx03430
Mismatch repair
vcx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vcx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VAA049_2698 (dnaX)
03430 Mismatch repair
VAA049_2698 (dnaX)
03440 Homologous recombination
VAA049_2698 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcx03032
]
VAA049_2698 (dnaX)
03400 DNA repair and recombination proteins [BR:
vcx03400
]
VAA049_2698 (dnaX)
Enzymes [BR:
vcx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VAA049_2698 (dnaX)
DNA replication proteins [BR:
vcx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VAA049_2698 (dnaX)
DNA repair and recombination proteins [BR:
vcx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VAA049_2698 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_4
AAA
AAA_22
RuvB_N
AAA_5
AAA_16
AAA_14
AAA_30
ResIII
AAA_18
AAA_2
AAA_assoc_2
AAA_19
PIF1
Mg_chelatase
SKI
TsaE
Motif
Other DBs
NCBI-ProteinID:
AKB04285
LinkDB
All DBs
Position
complement(2982905..2984983)
Genome browser
AA seq
692 aa
AA seq
DB search
MSYLALARKWRPTRFSEVVGQSHVLTALENALAQNRLHHAYLFSGTRGVGKTTIGRLFAK
GLNCETGITATPCGQCATCQEIDQGRFVDLLEIDAASRTKVEDTRELLDNVQYKPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKPISV
ENIQQQLDKVLHAEQISSDSKALNLLAHAADGSMRDALSLTDQAIALGNGVVKSDIVAHM
LGTLDTDHALHLLQAISLQTPQAVMDCIETLAQNGVEWDGLLQQLSTQLHRIAMYQALPA
TLDKSLPEASRIESLAKTLAPQDVQLYYQIALKGRQDLPLSPTARIGIEMLMLRMMAFRP
SHVSLASVIVPPNTAVTTPTIATPTSQMAASAPQPQPVAQSNVSQPASQAMPHPVAPPMM
AAQPVVESAVSVTQREASHSINAPEVSVATNTDTQSQASMPALAGLRHQLRSKRQEVQNK
GADGKKSDATSATPASALERIAQRAQQVQVSPERNDEDELEPEEEIYQWRPMQPIEVAVK
GEVTPTQLKKALEHEKTPEMVAKLIEEAVAQDAWSALVQRLETAKMVEQLALNSAFVRQG
DQISLTLRPSHAHLHNEKAQQELEQALNHVLGEACSLNITVGQEGETPLELRERLYQQKL
TSALHSLQTDPNVQFIERRFNAQLDSDSVRPI
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcttgctttagcacgcaaatggcgtccgacacgatttagcgaagtggtcgga
caatcccatgttttaaccgctttagagaacgctttggcgcaaaaccgtttgcaccatgcg
tacttgtttagtggcactcgaggcgtgggtaagaccaccataggtcgtttgtttgcgaag
gggctcaactgcgagacgggcataacggctacgccttgcggccagtgtgcaacctgtcaa
gaaattgatcagggacgctttgtggatctgctcgagattgacgcggcatcacgcaccaaa
gtggaagatacgcgcgaattgctcgacaacgtgcagtacaaacctgcgcgtggacgcttc
aaagtttacctgatcgatgaagttcatatgctctcgcgtcacagcttcaatgcgctactg
aaaacgcttgaagagccgcctgagtatgtgaagtttttgctggcaaccactgatccacaa
aagctgcctgtgaccatcttgtcgcgctgcttgcagttccatctcaaaccgatcagtgta
gaaaatatccagcagcagctcgataaagtgctgcacgccgaacagatctcgagcgacagc
aaagcactcaatctgctcgcccatgctgcggatggcagtatgcgcgatgctcttagtttg
accgatcaagcgattgcgttgggcaatggcgtagtgaaaagtgacatcgtcgcgcacatg
ctcggcacgctagacacggatcatgccctgcatctcttacaagccatcagcctgcaaacg
ccacaagcggttatggattgcatcgaaacgcttgcccaaaatggcgtagagtgggatgga
ttactgcaacagctttcgactcaactgcatcgaattgctatgtaccaagcgctgcctgcc
accttggataaatcgctgccagaggcatcgcggattgagtcgttggccaaaaccttagcg
ccgcaagatgtgcagctttactaccaaattgcgctcaaaggtcgacaagatttaccactg
tcacccacggctagaattggcattgaaatgttgatgctgcgtatgatggcgtttcgtcct
tctcacgtctccttggcgagtgtgattgtgccacccaatacggcagtgacaactccaaca
attgcgacaccgacttctcaaatggcggcttcagcaccgcaaccacaacccgttgctcag
tcaaacgtatcgcaacctgcctcgcaagcgatgcctcaccctgtcgcaccgccaatgatg
gcagcacaaccggtggtagaaagcgcggtgtcagtcactcagcgagaagcatcacactcg
ataaacgctccagaagtctctgttgccaccaataccgacacgcagagtcaagccagcatg
ccagccctagcagggttgcgtcatcaactgcgctctaagcgacaagaagtacaaaacaaa
ggcgcggatggaaaaaagtctgacgcgacatctgctactccagcgtcggcgctagagcgt
attgcgcagagagcacaacaagtgcaggtgtcgccagaacgcaatgatgaagatgagttg
gagcctgaagaggaaatctatcaatggcgcccaatgcaacctatcgaagtggcggtaaaa
ggtgaagtcacgccaacgcaactgaaaaaagcgttagagcatgaaaaaacgccggaaatg
gtagcgaagttgattgaagaagcggtcgcgcaagacgcgtggtcggcattggttcaacgg
ctagagactgccaaaatggttgagcaattggcgctgaattccgcttttgttcgccaaggc
gatcagatttctctgacgctacgtccaagccatgcgcatctgcacaacgaaaaggcgcag
caagagttagagcaggcattgaatcatgtgcttggtgaagcttgctctttgaacattacc
gtggggcaagagggtgaaacaccccttgagctgcgtgagcggctctatcagcagaaactc
acctctgcgctgcacagtttacaaactgatcccaacgtgcagtttattgagcgtcgattt
aatgcgcagctcgatagcgacagcgtacgacccatttaa
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