Vibrio cholerae O49 1154-74: VAA049_3046
Help
Entry
VAA049_3046 CDS
T03828
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vcx
Vibrio cholerae O49 1154-74
Brite
KEGG Orthology (KO) [BR:
vcx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcx03016
]
VAA049_3046 (truB)
Enzymes [BR:
vcx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
VAA049_3046 (truB)
Transfer RNA biogenesis [BR:
vcx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VAA049_3046 (truB)
Prokaryotic type
VAA049_3046 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
AKB02434
LinkDB
All DBs
Position
complement(3381112..3382050)
Genome browser
AA seq
312 aa
AA seq
DB search
MARRRKGRVIHGVILLDKPTGISSNDALQKVKRLYGAEKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDSDKRYRVIAKLGERTDTSDSDGQVVQTRPVHVDRDTLLACIAKFRGETDQ
VPSMFSALKYQGRPLYEYARQGIEVPREARKITVYEIELHRFEGDEVEMEVHCSKGTYIR
TIVDDLGEMLGCGAHVTMLRRVGVANYPYERMVTLEQLNALFEQAHRDEKAVADVLDPLL
LPMDTAVEALPEVNVIPELMTLIQHGQAVQVSGAPSDGMVRITGGEQKLFLGVGEIDDNG
KVAPKRLVVYGE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgacgtaaaggtcgggttatccacggtgtgattctgttggataagccgaca
ggtatctcttccaacgacgctttgcaaaaggttaaacgcctctatggcgctgaaaaagcg
ggacatactggcgcgcttgatcctctggcgacgggcatgttgccaatctgccttggtgaa
gccactaagttttcccaatttctgctcgattctgataaacgttatcgtgtgatcgccaaa
ttgggtgaacgtaccgacacctcagattctgatgggcaagtggtacaaacgcgtcctgtt
cacgtggatcgcgatacgctgctggcctgtatcgccaagtttcgcggtgaaacggatcaa
gttccatccatgttttcagcgttgaaataccaaggtcgtccactctacgaatacgcccgt
cagggtattgaagtgccgcgtgaagcgcgcaagatcactgtgtatgagattgagctgcat
cgctttgaaggtgatgaagttgagatggaagtacactgctcgaaaggcacttatattcgt
accatagtcgatgatctgggtgaaatgctgggctgtggagcacatgtgaccatgctgcgc
cgtgtgggtgtcgctaactatccgtatgagcgaatggtgacgctagagcaactcaacgct
ttgtttgaacaagcccatcgtgacgaaaaagcggtggcggacgttctcgatccgctatta
ctgccgatggatactgccgtggaagctttacctgaagtcaacgtgatcccagaactgatg
acacttattcagcatgggcaagcagtacaggtttcgggtgcaccatccgacggtatggtg
cgcatcactggcggcgagcagaagctattccttggcgttggcgagattgacgataacggc
aaggtcgcgccgaaacgcttggtggtgtacggcgaataa
DBGET
integrated database retrieval system
