Vibrio cholerae O49 1154-74: VAA049_3072 Help Entry VAA049_3072       CDS       T03828                                  Name (GenBank) HAMP domain protein   KO K19694   two-component system, sensor histidine kinase ChiS Organism vcx  Vibrio cholerae O49 1154-74 Brite KEGG Orthology (KO) [BR:vcx00001]  09180 Brite Hierarchies   09181 Protein families: metabolism    01001 Protein kinases [BR:vcx01001]     VAA049_3072   09183 Protein families: signaling and cellular processes    02022 Two-component system [BR:vcx02022]     VAA049_3072 Protein kinases [BR:vcx01001]  Histidine kinases   Other    VAA049_3072 Two-component system [BR:vcx02022]  Other families   Unclassified    VAA049_3072 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Response_reg HATPase_c HisKA HAMP PAS_8 PAS PAS_9 HATPase_c_2 B12-binding PAS_4 HATPase_c_3 Motif Other DBs NCBI-ProteinID:  AKB02782 LinkDB All DBs Position 3408983..3412372 Genome browser AA seq 1129 aa AA seqDB search MFRFYRKQKFKRLQNTLMAAFLALSIIPLTITALFFLHSHSKDLEQQSTSYLVSVRDNKQ QQVIDYMMAKESEVMGFVRSELAYASGGRFYGLVNAFQRLDVSIEAAREHAQQRYITGSG DQIKTSVLPQSSSYVGSERYRLLHKRYHWAYLELLKRSDFDDILLVDIDGNVVYSIYKYD NFGTNLLTGKYQDTNLGHTFKRLEQTVNEQRKTNEDFTPVVISDFVQEDGKQYAWLGAPI IQQGYLHSYAMFRLPSNAITKLIAEGSSNPSMQTILVGQDHRSRTLTSAEIAVEKSKAVV DLALSGKRAVGTYTNTDGEQIIAAYAPINLKNIHWALVVELPEKEAFARVRQLEKLFVFA MLTAIVLVVIASHYLSNFITSPLLKLTWAAERVSAGDLDEAMINTERKDEIGRLAVSFER MQRSIREKISLIKSQNKELESNLLIIRKQNDELQLANKLKDEFLATTSHELRTPLHGMIG IAEALISGANGPISAAHKYQLDIIISSGQRLATLVDDLLDYHKMRYGALDIQRCAVDLSS ATRLVLELSHHLLGKKTLRIINQVSEQPVWVSADPQRLEQVLYNLIGNAIKYTSEGKIVI SATYIDDKVRVQVVDTGQGIPAEQLEHIFEPLIQAGHDASRYRQGAGLGLSISRQLIELM HGTLYVSSQPMVGTTFSFTLPLASEEEIAQARLTELPHFQAPEVLDTELPEQSNLPENEH GPLLLVADDEPVNLRVLDSFLRLEGYRVHTAQDGHQVLEAIKREKPELVLLDIMMPGMSG YQVCEKLRQTYDHAELPIIMLTALNQSDDRVRGFEAGANDYLSKPFNKQELAARIVAHLT ASKAELRRIENAQLQKELKHRAMVEASLLETQGRLLEQLESAPEAILCVKEGNKVRFANE AAARLFRRTPEQLKRSNAEELIAPKFLNIEQEHYCGNIDVYVDDVRQHLSADVLRLPQGS GLQAMYIFNVGGSVNAARIHNLETAVEALSSYAFEGDKDKLQKLKELGGEFTRLADKASG EYQSKQDLMRAVLVEAMTSALNYWERVSGQSKFTFAEQSGLWRVYLDRSTLQTRTLDKYL RIETLPKTPRWRTVLNSLDYILEHCKEAGPERTHIEMQRDKLQKLLTSE NT seq 3390 nt NT seq  +upstreamnt  +downstreamnt atgtttaggttctatcgaaaacaaaaattcaaacgcctgcaaaataccttgatggctgcg tttttggccctcagcattattcctttgaccattactgcgttgtttttcctacattcacac agtaaagatctggagcagcagagcacctcttacctcgtttctgttcgggataataaacag caacaggtcatcgactacatgatggccaaagagtcggaagtgatgggttttgttcgctcc gagctggcttatgccagtggcgggcgtttttatggtctggtgaatgctttccagcgttta gacgtcagtattgaagcggctcgtgaacatgctcagcagcgctatatcaccggatcgggt gaccaaataaaaacctcggtgctcccccaatcaagcagctacgtgggcagtgaacgctat cgactgctgcataaacgctaccactgggcttacttagaactgctgaaacggtcggacttt gatgacattttattggtcgatattgatggcaacgtcgtttattcgatttataaatacgac aattttggcaccaacttattaacgggcaaataccaagacaccaatctaggccataccttc aagcgtttagaacaaacggtcaatgaacagcgcaaaaccaacgaagatttcacccctgtt gtgatttctgatttcgtgcaagaggatggcaaacaatacgcttggcttggcgcaccgatt attcagcaaggctacttgcatagttacgcgatgttccgcttaccaagcaatgcgatcacc aaactcatcgcagaaggcagtagcaatccttcgatgcaaaccattttggtgggacaagat caccgctcaagaaccttaacttccgccgaaattgcggttgaaaaaagtaaagctgtggtc gatttagccttatcgggcaaacgcgccgtaggcacttacaccaataccgatggtgaacag atcatcgcagcctacgcaccgatcaatttgaaaaatatccattgggctctggtggttgaa ctgccagagaaagaagcgtttgctcgcgttcgtcagttagaaaaactgtttgtttttgcg atgttgacggctatcgtcttagtggtcatcgcctcgcattacctttccaatttcattacc tcaccgcttttgaagctgacatgggcagccgaacgtgtttcggcaggcgatcttgatgaa gccatgatcaataccgaacgcaaagatgaaattggtcgcttggcggtaagttttgagcgt atgcagcgttccattcgcgaaaaaatatcgctgatcaaatcgcaaaataaagagttagaa agcaatttactgatcattcgtaagcaaaacgatgagttacagctagcgaataagctaaaa gatgagttcctcgcgaccacatcacatgaattacgcaccccattgcatggcatgattggt attgccgaagccctgatctcgggggcaaatggcccgatttcagcagcgcacaagtatcaa ctcgacatcattatcagcagtgggcaacgcttggcgactctggttgatgatctactcgat taccacaaaatgcgctatggcgcgctggatattcaaaggtgtgccgtcgatttatcgagc gctacacgcttggtcttggagctttctcaccatttacttggcaagaaaacgctgcgcatt attaatcaagtctcagaacaaccagtctgggtttctgcggatcctcaacgcttagagcaa gtcctgtataacttgatcggcaatgccattaagtacacttccgaaggcaaaattgttatc tccgcaacctatattgacgataaagtgcgagtgcaggtggtggatacaggtcaagggatt ccggcagaacaactggagcacatctttgagccattgattcaagcgggccacgatgcgagt cgctatcgccaaggcgcaggactcgggctttccatcagtcgtcagttaatcgaattgatg cacggcactctctacgtaagtagtcagccgatggttggcactacctttagcttcacgctg cctctggcgagcgaagaagagattgctcaagcgcgcttgaccgagctcccccacttccaa gcaccggaagtgttggatactgaactgcccgagcaaagcaacttacccgaaaatgaacat ggcccacttctgttggtcgccgatgatgaaccagtcaacctgcgtgtgctggacagcttt ttacgtcttgaaggttatcgcgtacataccgcgcaagatggccatcaagtacttgaagca attaaacgtgaaaaacctgaattggtgttactcgacatcatgatgccaggcatgagcggt tatcaagtgtgtgaaaaacttcgacaaacttacgaccacgctgaactgcctattattatg ctgacggctctcaaccagtctgatgaccgggtacgagggtttgaagctggagccaatgac tacttatccaaaccattcaacaaacaagagctggccgcgcgcattgtcgctcacctcacg gcgagcaaagccgaactgcgccgaattgagaatgcccagctgcaaaaagagttgaagcat cgcgctatggtagaagcgagcctattggaaacccaaggccgattattggaacagttagaa tctgcaccagaagcgattttgtgcgtcaaagagggtaataaagtacgttttgctaacgaa gcagcagcacgtttatttagacgtacccctgagcagctcaaacgctccaacgccgaagaa ctgattgctcctaaattcttgaatattgagcaagagcattactgcggcaatattgatgtt tacgtcgatgatgtgcgccagcatctctctgccgatgtccttcgcttgccgcaaggttct ggcttacaagcgatgtacatttttaatgtcggaggcagcgtcaatgccgcgcggattcat aacctcgaaaccgcggtagaagctctgtctagctatgctttcgaaggcgataaagacaag ctgcaaaaactcaaggaactgggtggggagtttactcgtcttgcagataaagcctcgggc gagtatcaatcgaaacaagatttgatgcgtgccgtgttagtcgaagccatgaccagtgcc ttgaactattgggaacgagtctcaggacaaagcaagttcacgtttgccgaacaaagtggc ttatggcgcgtttatcttgaccgcagcaccctacaaactcgtaccctagacaaatactta cgaattgagacactgcctaaaacaccgcgttggcgaaccgtactgaactcgctcgactat attcttgagcattgcaaagaagcaggccctgagcgtacccacatcgaaatgcagcgcgat aaattgcaaaaactcctgaccagtgagtaa

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