Vibrio cholerae O49 1154-74: VAA049_3073
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Entry
VAA049_3073 CDS
T03828
Name
(GenBank) peptide ABC transporter, periplasmic peptide-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
vcx
Vibrio cholerae O49 1154-74
Pathway
vcx02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vcx00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAA049_3073
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcx02000
]
VAA049_3073
Transporters [BR:
vcx02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
VAA049_3073
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Paralog
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GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AKB04098
UniProt:
A0A085SLP2
Structure
PDB
PDBj
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Position
3413283..3414953
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AA seq
556 aa
AA seq
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MLANIKKTALAAAVIAAATSVSAPAFARSELTIVPDFYPTMVRNFNPYLATNLRTTTDFI
YEPLVVFNEMKGNTPVFRLAESYKMADDLMSVTFDIRKGVKWSDGEAFTADDVVYSFGLL
KAKPELDQRGINKWVTSVEKVDEYKVRFRLSEANSNVPYEISLIPIVAEHVWKDVKDPTT
FTNENPVGTGPFTVIDTFTPQLYIQCRNPNYWDAANLEVDCLRVPQIANNDQLLGKIVNS
ELDWTSSFVPDIDRTYAAANPNHHYWYPAAGTQAFMVNFKNPDPAKKEALDNVDFRRAFS
MALDRQTIIDIAFYGSGTVNDFASGLGYAFEAWSDEATHKKYKGFNTYDVEGSKKLLAKA
GFKDVNGDGFVETPSGKSFELLIQSPNGWTDFNNTVQLAVEQLQEVGIKAKARTPEFAVY
NQAMLEGTYDVAYTNYFHGADPFTYWNSGYNSALQSGDGMPRFAMHYFTDKKLDGLLDSF
YKTADKNEQLAIAHGIQKIIAENQVTIPVMSGAWMYQYNTTRFTGWWSEENPKGRPSVWA
GIPERLLHVLDLKPVK
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgcttgccaatattaaaaagacagcactagccgccgcagtaatcgcagcagcaaccagt
gtttcagctccagcgtttgcacgtagtgagctcaccatcgtgccagatttctaccctaca
atggtacgtaacttcaacccgtacttagcgactaacctgcgtacaaccaccgactttatc
tatgaacctctggttgtattcaatgaaatgaaaggtaatacgcctgttttccgtctggca
gaaagctacaaaatggctgacgacctgatgagcgtgactttcgatatccgcaaaggcgtt
aagtggtctgacggtgaagcattcacagctgacgacgtggtttactctttcggcctgctg
aaagcgaaaccagaacttgatcaacgtggtatcaacaagtgggttaccagcgttgagaaa
gttgacgaatacaaagtgcgtttccgtttgtctgaagcaaactcaaacgtaccttatgaa
atttctctgatccctatcgttgctgagcacgtgtggaaagacgtgaaagatccaaccacc
ttcactaacgaaaatccagtaggtactggtcctttcaccgtgatcgacactttcactcca
caactgtacatccagtgtcgtaacccgaactactgggatgccgctaacctagaagttgac
tgtctgcgtgttccacaaatcgcaaacaacgaccaactactgggcaaaatcgttaactct
gagctcgactggacttcttcattcgttccagatatcgaccgtacttacgccgcagcgaac
cctaaccaccactactggtatccagcagcgggtactcaggcgttcatggtgaacttcaaa
aacccagatccagcgaaaaaagaagcactggataacgtagatttccgtcgtgcattctct
atggctctggatcgtcaaaccatcattgatatcgccttctacggcagcggtacagtgaac
gacttcgcatctggccttggctacgcattcgaagcatggtctgatgaagcgacccacaaa
aagtacaaaggcttcaacacttatgacgttgaaggctctaagaagctactggcaaaagcg
ggcttcaaagatgtgaacggtgacggtttcgttgaaactccatcaggcaaatcttttgaa
ctgctaatccaatctccaaacggctggactgactttaacaacacagttcaactggcggtt
gagcagctacaagaagtgggtatcaaagcgaaagcacgtactcctgaattcgcggtttat
aaccaagcgatgctagaaggtacttacgacgttgcgtacaccaactacttccacggcgct
gacccattcacttactggaacagcggctacaactcagctctacaatctggcgacggtatg
ccacgctttgcgatgcactacttcaccgataagaagcttgatggtttgctagacagcttc
tacaaaacagcggacaagaacgagcagttagcgatcgctcacggtattcagaagatcatt
gctgaaaaccaagtgactatccctgtgatgtctggtgcatggatgtatcagtacaacacc
actcgtttcactggctggtggagcgaagaaaatccgaagggccgtccaagcgtttgggct
ggtatcccagagcgtctactacacgtactggatctgaaaccagttaagtaa
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