Vibrio cholerae O49 1154-74: VAA049_3159
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Entry
VAA049_3159 CDS
T03828
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
vcx
Vibrio cholerae O49 1154-74
Pathway
vcx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vcx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
VAA049_3159 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcx03400
]
VAA049_3159 (mutS)
DNA repair and recombination proteins [BR:
vcx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
VAA049_3159 (mutS)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AKB02163
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Position
3502251..3504836
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AA seq
861 aa
AA seq
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MKSNASPSESLSHHTPMMQQYLRLKAENPDILLFYRMGDFYELFYDDAKRASELLDISLT
KRGASAGEPIPMAGVPFHAVEGYLAKLVQMGESVAICEQIGDPATSKGPVERKVVRIVTP
GTVTDEALLSERVDNLIAAIYHHNGRFGYATMDITSGRFQLSEPQTEEEMAAELQRTSPR
ELLFPEDFSPVHLMASRQGNRRRPIWEFELDTAKQQLNQQFGTRDLVGFGVEQAKLGLCA
AGCLIQYVKDTQRTALPHIRSLTWDRQDQSVILDAATRRNLELTHNLAGGTDNTLAEVLD
HCATPMGSRMLKRWIHQPMRDNATLNQRLDAITELKETALYGELHPVLKQIGDIERILAR
LALRSARPRDLARLRHAMQQLPELHSVMSELKQPHLTELRTHAEPMNELCDLLERAIKEN
PPVVIRDGGVIADGYSAELDEWRDLANGATEFLERLEAEERDRHGIDTLKVGYNNVHGFY
IQVSRGQSHLVPPHYVRRQTLKNAERYIIEELKQHEDKVLNSKSRALALEKQLWEELFDL
LLPHLEQLQQLAASVAQLDVLQNLAERAENLEYCRPTLVQKAGIHIQGGRHPVVERVMNE
PFIANPIELNPQRRMLIITGPNMGGKSTYMRQTALIALMAHIGSYVPAESASIGPLDRIF
TRIGASDDLASGRSTFMVEMTETANILHNATRNSLVLMDEIGRGTSTYDGLSLAWASAEW
LAKEIGAMTLFATHYFELTELPNVLPHLANVHLDAVEHGDGIAFMHAVQEGAASKSYGLA
VAGLAGVPKPVIKNARAKLQQLELLSSQPAETRKPSRVDIANQLSLIPEPSAVEQALAGV
DPDQLTPRQALDMLYQLKKLL
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgaacgcctcaccgagcgagtctctttcgcaccacaccccgatgatgcaacag
tatttaagactcaaggcggaaaacccagacattctgctgttctatcgcatgggtgatttt
tacgaactgttttatgacgatgccaaacgcgcctctgagctgctggacatttccttaacc
aaacgcggcgcatcggcgggtgaacccatcccgatggcaggggtgcctttccatgccgtg
gaaggttatttagcgaaactcgtccagatgggggaatcggtcgcgatctgcgaacagatt
ggtgacccagcgaccagcaaaggccccgttgagcgcaaagtggtgcggattgtgacaccg
ggaaccgtgaccgatgaagccctgctctcagagcgagtcgataacctgatcgcggcgatt
tatcaccataacggccgctttggctacgcgaccatggatatcacctccggccgttttcag
ctcagtgaaccgcaaaccgaagaagagatggcggcagaactgcaacgcacttcgcctcgt
gaactcttgtttcctgaagatttttcgccagtgcatctaatggcaagccgccaaggcaac
cgccgtcgcccaatttgggagtttgaactcgataccgcgaaacagcagctcaaccagcaa
tttggcacgcgcgatctggttggctttggggttgagcaagcaaaacttggcttgtgcgca
gcaggctgcttaatccaatacgtgaaagatactcagcgtactgctttgccacacatccgt
tcactgacttgggatcgccaagatcaatcggtgattttggatgccgcgacgcggcgcaac
cttgagctcactcataacttggcgggtggaacagataacacgcttgcagaagtactcgac
cattgtgcgaccccgatgggcagtcgtatgctcaaacgttggatccaccaaccgatgcgc
gataacgccactctcaaccagcgtttagatgcgatcactgagctcaaagaaaccgctttg
tatggggaactgcatcctgtactcaaacagattggcgatattgaacggatcctcgcccgt
ctagcgctgcgctcagcgcggccgcgcgatttagctcgcctacgccacgccatgcagcag
ttaccagaattgcactcggtcatgagcgagcttaagcagcctcaccttaccgagctacgc
acccatgccgagccgatgaatgaattgtgcgatttactcgaacgtgcgatcaaagaaaac
ccacccgtggtgattcgtgatggcggtgtcattgccgatggttacagtgctgaactggat
gaatggcgcgatttagccaatggcgcaaccgaatttctggaacgcttggaagccgaagag
cgcgatcgtcacggcattgataccctgaaagtgggttataacaatgtgcacggtttctac
attcaagtcagtaggggtcagagccatttagtgcctccccactatgtacgccgtcaaacc
ttaaaaaacgctgagcgttacatcatcgaagaacttaaacagcatgaagataaagtgctc
aattctaagtctcgtgctttagcgttagaaaaacagctgtgggaagagttgttcgatttg
ctgttgccgcatcttgagcagctgcaacaactggcggcttccgttgctcaattggatgtg
ctgcaaaacctcgcagagcgcgcagaaaacttggaatattgtcgcccaacgctggttcaa
aaggcaggcattcacatccaaggtggtcgccaccctgtggtagagcgagtaatgaatgag
ccgtttatcgccaacccgatcgaacttaatccacagcgacgcatgctgatcattactggc
ccgaatatgggcggtaaatcgacttacatgcgtcaaaccgccttgattgcactgatggcg
catatcggtagttatgtgcctgctgaaagtgcgtcaatcggcccactggatcgtattttt
acccgtatcggcgcgtccgatgatcttgcgtccggccgctcaacctttatggtggagatg
acggagaccgccaatattttgcacaatgcgactcgtaacagtttggtgttgatggatgag
attggccgcggtaccagtacttatgatggactctcgctcgcttgggcgagtgccgagtgg
cttgccaaagagattggtgccatgacgctgtttgccactcactattttgagttaaccgaa
ctgccgaatgtgttaccccatctagcgaatgttcatttagatgcggttgaacatggtgat
ggcatcgcctttatgcacgcagtgcaagagggtgccgcgagtaaatcgtatggtttagcc
gtagcaggactggctggcgtacccaagcccgtgattaaaaatgcgcgcgccaagttacaa
caacttgagctattaagctcacaacctgccgagactcgtaagccaagccgcgtcgatatt
gccaaccagttgagcttaattcctgagccaagtgccgttgagcaagccttggcaggcgta
gatcctgaccagctcacacctcgccaagctctggatatgctctatcaattgaaaaagctg
ctctag
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