Vibrio cholerae O49 1154-74: VAA049_3256
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Entry
VAA049_3256 CDS
T03828
Name
(GenBank) ribonuclease, Rne/Rng family domain protein
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
vcx
Vibrio cholerae O49 1154-74
Brite
KEGG Orthology (KO) [BR:
vcx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcx03019
]
VAA049_3256
03009 Ribosome biogenesis [BR:
vcx03009
]
VAA049_3256
Messenger RNA biogenesis [BR:
vcx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
VAA049_3256
Ribosome biogenesis [BR:
vcx03009
]
Prokaryotic type
rRNA processing factors
VAA049_3256
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
AKB03567
UniProt:
A0A0H5ZJI5
LinkDB
All DBs
Position
complement(3596610..3598079)
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AA seq
489 aa
AA seq
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MSAELLLNVTPSETRVAMIEGGILQEIHIEREAKRGIVGNIYKGKVSRVLPGMQAAFVDI
GLDKAAFLHASDIVPHTECVAESEKQQFQVRDISELVRQGQDIVVQVVKDPLGTKGARLT
TDITLPSRYLVFMPGASHVGVSQRIESEAERERLKKIVSHYCDEHGGFIIRTAAEGANEK
ELTQDAAFLKRLWSKVIERRSKYKNRSMLYGELGLAQRILRDFVGTELTKILIDSRQEFE
NLKEFTSEYVPELTAKLELYHGDKPIFDMYDTENEIQRSLERKVELKSGGYLIIDQTEAM
TTIDINTGAFVGRRNLEETIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMASDEHRKRV
LTSLETALMKDRVKTNINGFTQLGLVEMTRKRTRESIEHVLCSTCPTCEGRGSVKTVETV
CFEILREITRVNRAYDADKFVVYASPAVADTLQGEESHALAELEVFIGKEVRIQAEPLYN
QEQFDVVMM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagagttgctgttaaacgtcaccccgagtgaaactcgggtggcgatgattgaa
gggggaatccttcaggaaatccatattgaacgtgaagccaaacgcggcattgttggcaat
atttacaaaggcaaagtcagccgggtattaccgggcatgcaagctgcttttgtggatatt
ggactcgacaaggccgcttttttacatgcctcggatattgtgccccacaccgagtgtgtt
gccgaaagtgagaagcagcagttccaagtgcgtgatatttccgagctggtgcgccaaggg
caagatattgtcgtgcaagtggtcaaagacccgcttggtactaagggcgcgcgtttaact
accgatatcacactcccttctcgttatctggtctttatgccgggggcaagccatgttggc
gtatcacaacgcatcgaaagcgaagcggagcgcgagcgcctaaagaaaatcgtttctcat
tattgcgatgagcatggcgggttcattatccgaactgcagcagaaggggcaaacgaaaaa
gagttgactcaagatgcggcgtttcttaagcgtttgtggtcaaaagtgattgagcggcgc
agcaaatacaagaaccgctctatgctgtatggcgagcttggtctggcgcagcgcattttg
cgtgactttgtcggcaccgaactgaccaaaattctcatcgattcacgacaagagttcgaa
aacctcaaagagtttacctccgaatatgtccctgagctaacggctaaattagagctgtac
cacggcgataagcccattttcgacatgtatgatacggaaaatgagattcagcgctctctc
gaacgcaaagtggagctcaaatcgggggggtatctgatcatcgatcagaccgaagccatg
accacgattgacatcaatacgggcgcgtttgttggccgccgtaatctcgaagagaccatt
ttcaacaccaatattgaagcgactcaagccattgctcgtcagctgcgtctgcgcaatctg
ggtgggattatcattattgactttatcgatatggcgtcggatgagcaccgtaagcgagtg
ctcacctctttagagacggcgttgatgaaagatcgggtcaagaccaacatcaacggcttt
actcagcttgggttggtggagatgacgcgtaaaagaactcgagaaagcattgaacatgtg
ctctgttcgacttgtccaacgtgtgaagggcgaggcagcgtgaaaactgtggaaacggtg
tgctttgagattttgcgcgaaattacgcgcgtgaatcgagcctacgatgcggacaaattc
gtggtttatgcttcaccggcagtggccgatactttgcaaggtgaagagtcacatgccttg
gcggagttggaagtgttcattggtaaagaagtgcgaattcaagcagaaccactctacaac
caagagcaatttgatgttgtgatgatgtaa
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