KEGG   Vibrio cholerae O49 1154-74: VAA049_3399
Entry
VAA049_3399       CDS       T03828                                 
Name
(GenBank) exonuclease family protein
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
vcx  Vibrio cholerae O49 1154-74
Pathway
vcx03030  DNA replication
vcx03430  Mismatch repair
vcx03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vcx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    VAA049_3399
   03430 Mismatch repair
    VAA049_3399
   03440 Homologous recombination
    VAA049_3399
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vcx03032]
    VAA049_3399
   03400 DNA repair and recombination proteins [BR:vcx03400]
    VAA049_3399
Enzymes [BR:vcx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     VAA049_3399
DNA replication proteins [BR:vcx03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     VAA049_3399
DNA repair and recombination proteins [BR:vcx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     VAA049_3399
SSDB
Motif
Pfam: RNase_T Rv2179c-like DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: AKB01621
UniProt: A0A085RPD5
LinkDB
Position
3742141..3742770
AA seq 209 aa
MNWLLRRYWHAKLKGSPYQRLFETARHHEYVSLDCETTSLDPKRAELVTIAATKIVDNRI
ITSQPFEVRLCAPQSLDSGSVRIHRIRHQDLHDGLSEKEALLQLIEFIGNRPLVGYHIRY
DKTILDIACRKHLGFPLPNRLIEVSQIYHDKLEKHLPNAYFDLSLEAICRHLDLPLQDKH
DALQDAIAAALVFVRLTKGDLPQFIAPGV
NT seq 630 nt   +upstreamnt  +downstreamnt
atgaactggttattacgccgttattggcacgcgaaactcaaaggttctccctatcaacgg
ctatttgaaaccgcgcgccatcacgagtacgtctcgctcgactgtgaaaccaccagctta
gatcctaaacgcgccgagttagtgaccatcgccgcaaccaagatcgttgataaccgcatt
atcaccagccaaccctttgaggtgcgcctgtgtgcgccacaatcgctcgactcgggttca
gtgcggattcaccgtatccgccaccaagatctgcacgatggtttgagcgaaaaagaggca
cttctccaactaattgagtttattggcaatcgtcccttggtcggctaccacattcgttac
gataagacgattttggatatcgcctgtcgtaaacatctcgggtttccactccccaaccga
ctgattgaggtgagccagatctatcacgataaactggaaaaacatctgcccaatgcctat
ttcgatctcagtttagaggcgatctgccgccatctagatcttccactgcaagacaaacat
gatgcgctgcaagatgcgattgccgccgctttggtgtttgtgcgtttaaccaaaggcgat
ctgccacaatttattgcaccgggtgtgtaa

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