Vibrio cholerae O49 1154-74: VAA049_3408
Help
Entry
VAA049_3408 CDS
T03828
Name
(GenBank) bacterial regulatory s, lacI family protein
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
vcx
Vibrio cholerae O49 1154-74
Brite
KEGG Orthology (KO) [BR:
vcx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcx03000
]
VAA049_3408
Transcription factors [BR:
vcx03000
]
Prokaryotic type
Helix-turn-helix
LacI family
VAA049_3408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
Peripla_BP_4
LacI
HTH_10
HTH_23
HTH_24
HTH_IclR
HTH_3
DUF2937
Sigma70_r4
HTH_7
HTH_Tnp_ISL3
HTH_31
Hpr_kinase_N
Motif
Other DBs
NCBI-ProteinID:
AKB04117
LinkDB
All DBs
Position
3751511..3752509
Genome browser
AA seq
332 aa
AA seq
DB search
MTKKQRATLQDVADQVGVTKMTVSRYLRSPDSVAAATREKIALAVEALGYIENRAPAMLS
KSSSKAIGILLPSLSNQIFASFVQGIEAVTKANGYETLLAHFGYDEEEEERKIASLLAYQ
VDGLILTESHHTQRTLQMIASSGVPVVETMELPANPIDMAVGMDHVEASYQAVKKIIAAG
KRSIAYFGARLDTRTKLRMQGYDQAMQEAGLPIKHVLTGSHSSFSLAAQLLDEAFARYPD
LDGVFCTNDDIAIGTLLVAQQRGIRVPEQLSVIGYNALDIGRTITPKLTSVDSPRYAIGE
KSAELLIAALKGERAEEHIVDMGYRFTAGESV
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaaacagcgcgcgacattgcaagatgtggcggatcaagttggcgtaacaaaa
atgactgtgtcgcgttatctgagaagcccggattccgtggctgcggccacgcgggagaag
atagcgctcgccgttgaggctttgggatacattgaaaatcgcgcccctgcgatgctttct
aaatcatccagtaaggcgattggtattttgcttccttccttgtcgaaccaaatttttgcc
tcttttgtgcaagggattgaagcggtgaccaaagccaatggctatgaaaccctactcgcc
cactttggttacgatgaggaggaagaagaacgcaaaattgcttcgctgctcgcctatcaa
gtcgatggtcttattctcaccgaaagtcatcacactcagcgcactttgcagatgattgcc
agctctggcgtgcccgtggtcgaaaccatggagctgcctgctaacccgattgatatggcc
gtgggtatggatcacgtcgaagcctcttatcaggcggtgaaaaaaatcatcgctgcgggc
aaacgttcgattgcctatttcggcgcacggctcgatacccgtaccaaactgcgtatgcag
ggctatgaccaagcgatgcaagaagccgggctgcctatcaagcacgtgctgactggctca
cactccagtttctctctcgccgctcagttgcttgatgaagccttcgcgcgttaccccgat
ctggatggtgtgttctgcaccaatgatgacatcgcgattggtactctactggtggcgcag
cagcgtgggattcgggtgcccgaacagctttccgtgattggctataacgcgctggacatc
ggccgcaccatcacgccaaagctgactagcgttgattcgccacgttatgcgattggtgaa
aaaagcgctgagctactgattgccgcactcaaaggtgagcgcgctgaagaacatatagtg
gatatgggttatcgttttactgccggtgagagtgtgtaa
DBGET
integrated database retrieval system
