Vibrio cholerae O49 1154-74: VAA049_3423
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Entry
VAA049_3423 CDS
T03828
Symbol
hupA
Name
(GenBank) DNA-binding protein HU-alpha
KO
K05787
DNA-binding protein HU-alpha
Organism
vcx
Vibrio cholerae O49 1154-74
Brite
KEGG Orthology (KO) [BR:
vcx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcx03032
]
VAA049_3423 (hupA)
03036 Chromosome and associated proteins [BR:
vcx03036
]
VAA049_3423 (hupA)
03400 DNA repair and recombination proteins [BR:
vcx03400
]
VAA049_3423 (hupA)
DNA replication proteins [BR:
vcx03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
VAA049_3423 (hupA)
Chromosome and associated proteins [BR:
vcx03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
VAA049_3423 (hupA)
DNA repair and recombination proteins [BR:
vcx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
VAA049_3423 (hupA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
PT-TG
HU-CCDC81_euk_1
GTP_EFTU_D2
Motif
Other DBs
NCBI-ProteinID:
AKB03609
UniProt:
A0A085SAB8
LinkDB
All DBs
Position
complement(3772669..3772941)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTQLIDFIAEKADLTKVQAKAALEATLGAVEGALKDGDQVQLIGFGTFKVNHRSARTG
RNPKTGEEIKIAAANVPAFVAGKALKDAIK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagacccaattgatcgactttatcgcagagaaagcggacctgactaaagtgcaa
gcgaaagcagctcttgaagcgactctgggtgcggttgaaggtgctctgaaagacggcgac
caagtacaactgattggttttggtacattcaaagttaatcatcgttctgctcgtactggc
cgtaatccaaagaccggtgaagagatcaaaattgcggcagctaacgttcctgcattcgta
gcaggtaaagcgctgaaagacgcgatcaagtaa
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