Vibrio cholerae O49 1154-74: VAA049_389
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Entry
VAA049_389 CDS
T03828
Name
(GenBank) DNA polymerase III chi subunit, HolC family protein
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
vcx
Vibrio cholerae O49 1154-74
Pathway
vcx03030
DNA replication
vcx03430
Mismatch repair
vcx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vcx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VAA049_389
03430 Mismatch repair
VAA049_389
03440 Homologous recombination
VAA049_389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcx03032
]
VAA049_389
03400 DNA repair and recombination proteins [BR:
vcx03400
]
VAA049_389
Enzymes [BR:
vcx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VAA049_389
DNA replication proteins [BR:
vcx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VAA049_389
DNA repair and recombination proteins [BR:
vcx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VAA049_389
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_chi
Motif
Other DBs
NCBI-ProteinID:
AKB02793
LinkDB
All DBs
Position
complement(404315..404764)
Genome browser
AA seq
149 aa
AA seq
DB search
MPTATFYLISPDSAQATPEGFAQYVLYLTRHFAAQGARIYLQCQDKPHAEQLAERFWQIE
PEQFLAHNLVGEGPKSGTAIEIGYVGVSPSWNRQLAINLADNQTTFARTFTEVVDFVPCA
ENAKQLARERYKLYRQAGYQLQTVEIQYP
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccgcaactttttacctgatttctccagattctgctcaagcaacaccagaaggc
ttcgcgcagtacgtgctgtatttgacgcgtcactttgccgcgcaaggcgcacgcatttat
ctgcaatgccaagataaaccacacgccgagcagctagctgagcgattttggcaaatcgaa
cccgaacagtttttagcgcacaatctggtgggtgaaggtcccaaatccggtaccgcgatt
gagataggttatgtgggtgtctccccttcttggaatcgtcaactggcaataaatttggcg
gataatcagacaacctttgcgcgtacctttaccgaggtggtagacttcgtgccctgcgca
gaaaatgccaagcagctggcgcgcgagcggtataaactctatcgacaagcaggttatcag
ctgcaaactgttgagattcagtatccataa
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