Vibrio cholerae O49 1154-74: VAA049_441
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Entry
VAA049_441 CDS
T03828
Name
(GenBank) HAMP domain protein
KO
K07678
two-component system, NarL family, sensor histidine kinase BarA [EC:
2.7.13.3
]
Organism
vcx
Vibrio cholerae O49 1154-74
Pathway
vcx02020
Two-component system
vcx05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VAA049_441
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VAA049_441
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
vcx01001
]
VAA049_441
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vcx02022
]
VAA049_441
Enzymes [BR:
vcx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
VAA049_441
Protein kinases [BR:
vcx01001
]
Histidine kinases
NarL family
VAA049_441
Two-component system [BR:
vcx02022
]
NarL family
BarA-UvrY (central carbon metabolism)
VAA049_441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
sCache_4
HATPase_c
Response_reg
HisKA
Hpt
HAMP
HAMP_2
PDE8A_N
HATPase_c_3
TrkA_N
B12-binding
Baculo_PEP_C
Motif
Other DBs
NCBI-ProteinID:
AKB04570
LinkDB
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Position
complement(455564..458311)
Genome browser
AA seq
915 aa
AA seq
DB search
MTLTLAPTLIIGLLLSALFSFNRYHDLETQVINSGASIIEPLAIASEDALRMQSRESVRR
IISYAHRKNSKLVRSIAVFDANHELFVTSNFHPNFEKLMYPKDKPIPFLSSSAIDENTLI
LRTPIISERTVLDNGDANPATPVMGYIAIELDLSSLRLQQYPEIFSAGLVLVIGILLSGV
FASRLMYDVTRPITHMKNMVDRIRRGHLDVRIEGKMHGELDTLKKGINAMAVSLSEYHVE
MQHSIDQATSDLRETLEQLEIQNVELDIAKKRAQEAARVKSEFLANMSHELRTPLNGVIG
FTRQMLKTQLTNSQADYLQTIEKSANNLLTIINDILDFSKLEAGKLALENIPFEFQEVLE
EVVNLQATSAHEKGLEITLKIDPKIPRGVVGDPLRIQQVLTNLVGNSIKFTERGNIDVSV
EMRALRDDVIDLQFMVRDTGIGISERQQAQLFQAFSQADASISRRYGGTGLGLVITQKLV
SHMGGEISLTSRLHQGSTFWFTLRLHTTELPLNDGYNADSLNHRHLLLIEPNMQAAAIVQ
QTLVQSGLEVTYRSAIPEEQHVYDYVLLNLAPSKETNPTLVELWVQRALAMTHNVIVGVP
STELALADQLMQRYPVKCISKPLSRKKLLQTLAAQQPQLANTSLPKPQADKLPLCVMAVD
DNPANLKLITALLQERVEYVVSCTSGQEAIEQAQSRQFDIILMDIQMHMDGVTACKAIKQ
LKGYRDTPVIAVTAHAMAGERDRLLKAGMDDYLTKPIEEHILQQVLVHWSPHTRSKQVAK
VTPPDGAAVISNALPSSPPAEEAIIDWPVALRQSANKEDLAKEMLGMLVDYLREVETVVN
TALEDEEYPASDLLHHIHKLHGSCSYSGVPRLRKICASLEQALRNGASIDELEPELFELQ
DEMAKVLEASRDYLN
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgacgctcactttggcacctaccctgattattggtctgctgcttagcgctctgttctct
tttaaccgttatcacgatttagaaactcaagtgatcaattccggtgccagcatcattgag
ccattagcgatcgccagtgaagatgcgctgcgtatgcagagccgagaatcggtacgacgc
attatcagctatgcccaccgtaagaattctaagttagtacgtagcatcgcggtgtttgat
gccaatcatgagctgtttgtcacctcgaacttccaccccaatttcgaaaagctgatgtat
cccaaggataagccgatcccgtttctgagtagttccgcgattgacgagaacacgctgata
ttacgaacgccgatcatttctgaacgtaccgtgctcgacaatggcgatgccaatcccgcc
acaccggtgatgggttatattgcgatagaactggatctctcctcactgcgtttacaacag
tatccggaaattttttccgctggtttagtgctagtgatcgggattttgctgtcaggggta
tttgcttcgcgcttgatgtacgatgtgactcgcccaatcactcacatgaaaaatatggtc
gaccgcattcgtcgcggccatttggatgtgcggattgaaggtaaaatgcacggcgagttg
gatacgctgaaaaaaggcatcaacgcgatggcggtatcgctctccgaataccatgtcgaa
atgcagcacagtatcgaccaagcgacgtctgatctccgggaaacccttgaacagcttgag
attcaaaacgttgaactcgatattgccaaaaagcgcgctcaagaagcggcacgagtgaaa
tccgagtttctggctaacatgtcccatgagctgcgcaccccactcaatggtgtgattggt
tttacgcggcaaatgctgaaaacccagctgaccaacagccaagcggattatctacaaacc
attgaaaaatcagccaataatcttctcaccatcatcaatgacattttagatttttccaaa
ctcgaagccggtaagctggctttggagaatattccgtttgaattccaagaagtattggaa
gaggtggttaacctgcaagccaccagcgcgcatgaaaaagggttagaaatcaccctcaag
attgacccgaaaattccgcgcggcgtggtgggtgatccgctacggattcagcaagtcttg
accaacttggtcggtaactccattaagtttaccgaacggggtaatatagacgtgagcgtg
gaaatgcgcgcgctacgcgatgatgtgatcgacctgcaatttatggtgcgcgacaccgga
attggcatttctgagcgccagcaagctcagttattccaagcctttagccaagcggatgcc
agtatttcacgccgttatggcggtacaggacttgggttggtgattacccaaaaactggtc
agccatatgggcggagaaatcagcctcaccagccgtttgcaccaaggttcaaccttctgg
ttcacgctgcgcctgcataccacagagctgcctctcaatgacggttataacgcggactcg
ctcaatcatcgccacttgctgctgattgaacccaatatgcaagccgctgcgattgtgcag
caaacgctggtccaaagtggtttagaagtgacgtaccgctcagcgattccggaagagcaa
cacgtttacgactatgtactgctcaacttagcgcctagtaaagagaccaatccgaccttg
gtggagctttgggtgcaacgcgcgttagccatgacccacaatgtgattgtcggtgtgccg
agcacagaactggcgctcgccgaccaattgatgcagcgctacccagtaaaatgcatcagt
aagcctttatctcgcaaaaaactgctacaaaccttggcagcgcaacagccgcaactcgcc
aataccagtttgcccaaacctcaagccgataagcttccgctgtgcgtcatggcggtcgat
gataatccagccaacctcaaactcatcactgcgctattgcaagagcgggttgagtacgtg
gtctcttgcaccagcggtcaggaggcgattgagcaagctcagagccgtcagttcgatatt
atcttgatggacattcaaatgcacatggatggagtgaccgcttgtaaagcgatcaagcag
ctcaaagggtatcgtgatacgccagtcattgcggtcaccgcacatgccatggcaggcgag
cgtgaccgtctactgaaagcggggatggatgattacctgaccaaaccgattgaagagcat
attctgcaacaagtgttggtacattggagcccgcacacgcgcagtaaacaggtcgcgaaa
gtgaccccacccgatggtgccgcggtcatatctaacgcattaccctcatcaccgccagca
gaagaggccattattgattggcctgtcgcgctgcgccaatccgccaataaagaggatctc
gccaaagagatgctcggcatgttggtcgattatttgcgggaagtcgaaactgtggtcaat
actgcgcttgaggatgaagaataccccgctagcgatctgctgcatcatatccataagttg
catggcagttgttcgtacagcggcgtaccgcgcctgcgaaaaatctgcgccagtttggag
caagcgctgcgcaatggagcgagtatcgatgagttagagcctgagttatttgagttgcaa
gatgagatggcgaaagtgctcgaagcctctcgcgactatctgaactga
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