Vibrio cholerae O49 1154-74: VAA049_443
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Entry
VAA049_443 CDS
T03828
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
vcx
Vibrio cholerae O49 1154-74
Brite
KEGG Orthology (KO) [BR:
vcx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcx03009
]
VAA049_443 (rumA)
Enzymes [BR:
vcx01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
VAA049_443 (rumA)
Ribosome biogenesis [BR:
vcx03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VAA049_443 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
TRM5-TYW2_MTfase
PCMT
RrnaAD
Methyltransf_15
Cons_hypoth95
MTS
Methyltransf_11
Methyltransf_4
PrmA
Methyltransf_23
FtsJ
DOT1
Ubie_methyltran
TPMT
Ribosomal_L22
Methyltransf_12
Methyltr_RsmB-F
Motif
Other DBs
NCBI-ProteinID:
AKB03326
LinkDB
All DBs
Position
458516..459838
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AA seq
440 aa
AA seq
DB search
MARFFQPKKHSTLDTKHQPVTIERLDHQGSGLAFLHKKPLFVDGALPGEEVLIQLTENKS
KYARGQLIKVLKPSAERVAPFCAHYAQCGGCDLQHLDRAGQIHHKQQALSQLMVKFAGQS
LALSAPVCSDDQGYRRRARLSLMWDKKTQQLQLGFRRKQSKAIVNVTDCPVLEPSLNALL
PDLNALLSKWSQPERLGHVELVKGDNTRVLVLRHLGALIEQDQQRLTDFASQNQLTLYLM
PEAGELQHVQGEAPYCEETGSRLSFLPSHFIQVNRAVNQQMVAQALNWLEVSPQERVLDL
FCGLGNFTLPLAKQAQAVVGVEGVDEMVQHATHNAKLNQINNVAFYQANLEQDMTSASWA
QQKFAKVLLDPARAGAEGIVDQLSALGAKRVVYVSCNPATLARDSQSLLSQGFRLEKLGM
LDMFPHTSHLESMALFVKKG
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtttctttcaaccgaaaaagcacagcacgttagacacaaagcatcagccggtc
actattgaacggttggatcaccaaggcagcggactggcctttttacacaagaaacccttg
tttgttgacggcgctttgccgggggaagaggtgctgattcagctcactgaaaacaagagc
aaatacgcgcgcggtcaactgattaaagtgttgaaacccagcgctgagcgtgttgcacct
ttctgtgcgcattatgcgcaatgtggtggttgcgatttacagcatcttgaccgagcggga
caaatccatcacaagcagcaagccttaagtcaattaatggtgaagtttgcagggcagagt
cttgctctgtctgcgccagtttgttctgatgatcaaggctaccgtcgtcgtgcacgctta
agcctgatgtgggataagaaaactcagcaactacaattgggttttcgccgcaagcagagc
aaagcgattgttaatgtgaccgattgccccgtgctggagccgagtttaaatgcgctattg
cctgacttgaacgctttgttgagtaagtggagtcaacctgagcggttggggcatgtcgaa
ttggtgaaaggggataacactcgcgtgttggtgctgcgccatttaggcgcgctgattgaa
caagatcagcagcgtttgactgactttgcttcgcaaaaccaactaaccttatatctgatg
ccggaagcaggcgagttgcaacatgtgcaaggtgaagcgccatactgtgaagaaacaggc
agccgcttaagtttcttgcccagtcattttattcaggtcaatcgcgcggtgaatcagcaa
atggtcgcgcaagccttgaattggcttgaggttagcccacaagaacgcgtgctcgatctc
ttctgtggcttaggaaatttcacgctgccgctggccaaacaagcgcaagcggtggtgggt
gttgaaggtgttgatgagatggtgcaacacgccactcataacgcgaaattgaaccaaatc
aataatgtggcgttttatcaggccaatttggaacaagatatgacgagcgcctcatgggcg
cagcagaaatttgctaaagtactgctcgacccagcccgcgcaggcgcagaagggattgtg
gatcaactctctgcgttaggtgccaagcgggttgtgtacgtgtcgtgtaaccctgcgaca
ttagcacgagacagtcaaagcttgctgagccaaggatttcgcttagagaaactggggatg
ctcgatatgttcccgcacaccagtcatctcgagtccatggctttgtttgtgaaaaagggc
tag
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