Vibrio cholerae O49 1154-74: VAA049_53
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Entry
VAA049_53 CDS
T03828
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
vcx
Vibrio cholerae O49 1154-74
Pathway
vcx00730
Thiamine metabolism
vcx01100
Metabolic pathways
vcx01240
Biosynthesis of cofactors
Module
vcx_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
vcx00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
VAA049_53 (thiC)
Enzymes [BR:
vcx01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
VAA049_53 (thiC)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AKB02218
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Position
52634..54571
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AA seq
645 aa
AA seq
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MSNRKQARLEAKRFIDTLSVEPYPNSHKSYLLGSRPDIRVPVREITLSDTLVGGSKYAPI
FEPNEPICVYDTSGVYTDPSHDIDLYKGLPKLREEWIEERRDTHILPSMSSHFARERLAD
ETLDELRYGHLPRIRRAIGQHRVTQLHYARQGIITPEMEFVAIRENSRRLAHQDPSLLQQ
HAGQNFGANLPELITPEFVRREIAEGRAIIPCNINHPESEPMIIGRNFLVKVNANIGNSS
VSSSIEEEVEKLVWATRWGADTVMDLSTGRNIHETREWILRNSPVPIGTVPMYQALEKVN
GVAENLTWEVMRDTLLEQAEQGVDYFTIHAGLLLRYVPMTAKRVTGIVSRGGSIIAKWCL
SHHQENFLYTHFREICEICAQYDVALSLGDGLRPGSIADANDEAQFAELRTLGELTKIAW
EYDVQVMIEGPGHVPMHLIKANMDEQLKHCHEAPFYTLGPLTTDIAPGYDHITSGIGAAM
IGWFGCAMLCYVTPKEHLGLPNKDDVKTGLITYKLAAHAADLAKGHPGAQIRDNALSKAR
FEFRWEDQFNLALDPVTARAFHDETLPQESGKVAHFCSMCGPKFCSMKISQEVRDYANNQ
RLDTTVIDLVMPAESIQQAMQDKSREFLASGSELYHPLVKEPIEE
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccgtaaacaagcaagactggaagccaagcgctttattgataccctttctgtt
gaaccctatccgaactctcacaaatcttacctattaggttctcgccctgatattcgggta
cctgtcagagaaattactctcagcgatactttggtcggtggcagtaaatatgcacccatc
tttgagcccaatgagcctatctgtgtgtatgacacatctggcgtctatactgacccttca
catgatattgatctctacaaggggcttcctaagctcagagaggagtggattgaagagcgt
cgagatacgcacattctgcctagtatgagctctcatttcgcccgtgaacgcttagcggat
gaaactctagatgaactgcgttatggacatttaccgcgaattcgccgagcgataggccag
catcgagtcactcagttacattacgcacggcagggaatcattacgccggaaatggagttt
gtggcgatccgtgaaaactctcgtcgtcttgctcatcaagatccaagtctacttcagcag
catgctgggcagaattttggtgctaatttgcctgaactgattactcctgagtttgtgcgt
cgtgagattgcagaagggcgcgctattatcccatgcaatattaatcatcctgaatctgaa
cccatgattattggccgcaatttcttggttaaggtaaatgccaatatcggtaactcttct
gttagctcttctattgaagaagaagtcgagaagttagtttgggcgacccgctggggcgca
gatactgtgatggatctgtcgacagggcgaaatatccatgaaacccgtgagtggatctta
cgcaatagccccgtgccaattggtactgtacctatgtatcaggcgctggaaaaagtgaat
ggtgtagcagaaaacctcacatgggaagtgatgcgcgataccttactagagcaagctgag
caaggtgtggactattttacaattcatgcgggcttgttattgcgctatgtgccgatgaca
gcgaagcgcgtaacggggatcgtttctcgtggcggctcgattattgcgaaatggtgtctg
tctcaccatcaggagaattttctttatacccattttcgtgaaatctgtgagatttgtgcg
caatatgatgtggctctgtccctaggggatggacttcgtcctggctcgattgctgatgct
aacgatgaagcacaatttgctgagttacgtacccttggtgagctaaccaaaatagcttgg
gaatatgatgttcaggtcatgattgaagggccggggcatgtacctatgcacttaattaaa
gccaatatggatgagcagctcaagcattgtcatgaggcgccattctacacccttggtcca
ttaacgaccgatattgctcctggctatgatcacatcacctctggtatcggtgcggccatg
attggttggtttggctgcgccatgctctgctatgtcacacctaaagaacatttgggtctg
ccgaataaagacgatgtcaaaacaggattgattacttataagttagcggcccatgctgct
gatttggcgaaagggcatccgggagcacaaattcgtgataatgcattatcaaaagcacgt
tttgagtttcgttgggaagaccagttcaatcttgcgcttgatcccgtcacagcgcgcgct
ttccatgatgagacgctaccgcaggaatcgggaaaagtggcgcacttttgctctatgtgt
ggccctaaattctgctcgatgaagatctcgcaagaggtcagggattacgcaaataaccag
agattagacaccaccgttattgacttggtcatgcctgcggaatctatacagcaggcgatg
caagataagtctcgtgagtttttagcctcaggttctgaactctatcatcctttggtgaaa
gagccgattgaggagtaa
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