Vibrio cholerae O49 1154-74: VAA049_750
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Entry
VAA049_750 CDS
T03828
Name
(GenBank) bacterial regulatory, Fis family protein
KO
K10943
two-component system, response regulator FlrC
Organism
vcx
Vibrio cholerae O49 1154-74
Pathway
vcx02020
Two-component system
vcx02040
Flagellar assembly
vcx05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VAA049_750
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VAA049_750
09142 Cell motility
02040 Flagellar assembly
VAA049_750
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vcx02022
]
VAA049_750
02035 Bacterial motility proteins [BR:
vcx02035
]
VAA049_750
Two-component system [BR:
vcx02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
VAA049_750
Bacterial motility proteins [BR:
vcx02035
]
Flagellar system
Flagellar assembly proteins
Others
VAA049_750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
HTH_30
AAA_2
Mg_chelatase
HTH_20
MCM
AAA_16
MerR
HTH_24
HTH_11
AAA_7
AAA_19
HTH_28
FleQ
DUF2089
AAA_3
HTH_5
AAA
HTH_Crp_2
Sigma70_r4_2
HTH_10
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
AKB02189
LinkDB
All DBs
Position
800818..802251
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AA seq
477 aa
AA seq
DB search
MAQSKVLIVEDDEGLREALIDTLALAGYEWLEADCAEDALLKLKSHSVDIVVSDVQMAGM
GGLALLRSIKQHWPNLPVLLMTAYANIQDAVSAMKDGAIDYMAKPFAPEVLLNMVSRYAP
VKSDDNGDAVVADTKSLKLLALADKVAKTDANVMILGPSGSGKEVMSRYIHNASPRKEGP
FIAINCAAIPDNMLEATLFGYEKGAFTGAVQACPGKFEQAQGGTILLDEISEMDLNLQAK
LLRVLQEREVERLGSRKSIKLDVRVLATSNRDLKQYVQAGHFREDLYYRLNVFPLTWPAL
CERKDDIEPLANHLIERHCKKLGLPVPSIAPNAIIKLLNYPWPGNVRELDNVVQRALILS
ENGHIQSEHILLEGVDWHDASSLQQAVAGESMAAPQIKPVAEPELFKPLVQGSGQNSSSQ
GSGLGGELRDQEFAIILDTLAECQGRRKEMAEKLGISPRTLRYKLAKMRDAGIDIPG
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaagcaaagtcttaatcgtagaagatgacgaaggtcttcgcgaagcgttgatc
gacaccttagctttagcgggttatgagtggctggaagccgattgtgcagaagatgccctg
ctcaaactcaaatcacacagtgttgatattgtggtgtctgatgtgcaaatggcaggcatg
ggtggactcgctctgctgcgcagtatcaaacagcactggccgaacttacccgtactgctg
atgaccgcttacgccaatattcaagatgccgtatccgccatgaaagatggcgcgattgac
tacatggccaagccttttgcaccagaagtgctgctgaacatggtcagccgttacgcacca
gtaaagtcagatgacaacggcgatgctgtggtcgcggatacgaaaagcctcaagctgctt
gccttagccgataaagtggcgaagaccgatgccaacgtgatgattttggggccaagcggc
tcaggtaaagaagtgatgtcacgttacatccacaatgcctctcctcgtaaagaggggcca
tttattgcgatcaactgcgcggcaattccggacaacatgttagaagcaaccctattcggt
tacgaaaaaggcgcgtttaccggagccgtacaagcgtgtcccggtaagtttgaacaagcc
caaggtggcaccattttgctcgatgagatcagcgaaatggatctcaatctgcaagcgaaa
ctgctgcgggtactgcaagagcgtgaagtggagcgcttagggagccgcaaaagcatcaag
ctcgatgtgcgcgtgctcgcaaccagtaaccgtgacttgaaacagtacgtgcaagccgga
cattttcgtgaagacctgtactaccgtttgaatgtgttcccattaacctggccagccttg
tgtgaacgtaaagacgatattgaaccgctggctaaccatctgattgagcgtcactgcaaa
aagttaggtttacctgtaccaagcattgcgcctaacgccattattaaactgctgaattac
ccatggccgggtaatgtgcgcgagctggataacgtcgtgcagcgtgctttgatcttaagt
gaaaacggccatattcaaagtgagcacattttgctggaaggggtcgattggcacgatgcc
agcagcttacagcaagcggtggcgggggagtcgatggctgcaccgcagatcaaacctgtt
gcagagcccgaactgtttaagcccttagtgcaaggtagtgggcaaaatagtagttcgcaa
ggttcaggtttggggggtgaactgcgcgaccaagagtttgcgattattcttgatacgttg
gccgaatgtcagggacgccgtaaagagatggcggagaagctaggtattagcccacgcact
ttacgttacaaactcgccaaaatgcgtgatgcagggattgatatccccggttga
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