KEGG   Vibrio cholerae O49 1154-74: VAA049_889
Entry
VAA049_889        CDS       T03828                                 
Name
(GenBank) DEAD_2 family protein
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
vcx  Vibrio cholerae O49 1154-74
Brite
KEGG Orthology (KO) [BR:vcx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vcx03400]
    VAA049_889
Enzymes [BR:vcx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     VAA049_889
DNA repair and recombination proteins [BR:vcx03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    VAA049_889
SSDB
Motif
Pfam: Helicase_C_2 DEAD ResIII DEAD_2 Helicase_C T4SS-DNA_transf UvrD-helicase
Other DBs
NCBI-ProteinID: AKB03858
LinkDB
Position
947750..949690
AA seq 646 aa
MIEKTFSQQGALGQAIPGFQPRQAQVDMAKAVASAIANQSQLVVEAGTGTGKTFAYLVPA
LLSGKKVIISTGSKNLQEQLFHRDLPLMVSALGFFGQVALLKGRANYLCLDRLSRQMVES
HTPESDPTLLTQLVKVRSWASSTQSGDLGECDDLAEDSPIIPTITSTNDNCLGKECASYQ
DCFVSKARRRAMDADVVVVNHHLFLADLAIKETGFGELIPEAEVFIFDEAHQLPDIASQY
FGQSVSSRQVQELAKDIELGYRTEAKDMRQLQKVSDKLVQAAMDLRIVLGEPGYRGNWRE
VLKVPTVAREVERLNEALQFALDVLKLALGRSQLLDTAFERATLILGRIRRVCDVSVTGY
SYWYDTTPRHFSLHITPLSVADKFREQIALKEGAWIFTSATLAVNEDFSHFTERLGLTPS
AQFSLVSPFDYQQQAVLCVPRYLPEPNSPGLAEKLVRMLAPVIEHNQGRCFFLCTSHSMM
RDLGERFRERLTLPVLMQGETSKQKTLAEFMELGNALLVATGAFWEGIDVRGDTLSCVII
DKLPFTAPDDPLLKARIEDCRLRGGDPFAQVQLPEAVITLKQGVGRLIRDKNDKGVLIIC
DNRLVTRDYGGVFLASLPPIPRTRDLDVVTTFLQQLAITEINQRDS
NT seq 1941 nt   +upstreamnt  +downstreamnt
atgattgaaaaaaccttttcccagcaaggcgctttaggccaagccattccgggctttcaa
cccagacaagcacaagtcgatatggcgaaagcggtcgccagtgctatcgccaaccaatct
caattagtggttgaagcgggtaccggaaccggcaaaaccttcgcgtatttagtgcctgcg
ctgctcagtggcaaaaaggtgatcatcagtaccggttctaaaaacctgcaagagcagctt
ttccatcgcgatttgcctttaatggtcagtgcgttaggctttttcggccaagtcgctctg
ctcaaagggcgtgcaaactatctctgtcttgaccgtctaagtcggcaaatggtcgaaagc
catacccccgaatctgatcccacgctgctcactcaactggtgaaagtacgcagttgggca
tccagtacccagagcggcgatttaggtgaatgtgatgatttggcggaagatagcccgatc
atcccaaccattacttcaaccaacgacaactgcttagggaaagagtgtgccagctaccaa
gactgctttgtttccaaagcgcgtcgtcgcgcgatggatgccgatgtggtcgtggtgaac
catcacctatttctggccgatttggcgatcaaagagacgggctttggtgagttaattccg
gaagccgaagtgtttattttcgatgaagcgcaccaattgccggatatcgcgagccaatat
tttggtcagtcggtatcgagccgacaagtgcaagagctggcgaaagacattgaactcggt
tatcgcaccgaagcgaaagacatgcgccagctacaaaaagtgtcggataagctagtgcag
gctgcgatggatttgcgcattgtgcttggcgagccgggctatcgtggcaactggcgtgaa
gtgctgaaagtgccgaccgtggcaagggaagtggaacggctcaatgaagcgctgcaattt
gcgttggatgtgctcaagctggctttggggcgcagtcagcttctggatacggcatttgaa
cgtgcaactttgatcttaggccgcattcgccgtgtgtgtgatgtttctgtcactggatat
tcctattggtatgacaccacgccgcgccatttcagtttgcacatcaccccactgtcggta
gcagataaatttcgtgaacagattgcgttaaaagagggcgcgtggatattcacttccgca
accttagcggtcaacgaagatttcagccactttactgagcggctagggctgacgccgagt
gcgcagttttcgctggtcagcccatttgattatcagcagcaagcggtcttgtgcgtgccg
cgctatttacccgagccgaacagtcccggccttgctgagaaactggtacgcatgctcgcg
ccagtgatcgaacataaccaagggcgctgtttctttttatgtacatcgcacagcatgatg
cgcgatctaggcgagcgttttcgtgaacgtttgaccttgccagtgttgatgcaaggagaa
accagtaagcagaaaacgttggctgaatttatggagctgggcaatgccctgttggtcgca
actggtgctttctgggaagggatcgacgtgcgaggcgacactttaagctgtgttatcatc
gacaaattgccgtttaccgcacctgatgacccgttgctcaaagctcgcattgaagattgt
cgtttgcgcggtggcgatccatttgcgcaggtgcaacttcccgaagcggtgatcacctta
aagcaaggtgtggggcggctgatccgcgataaaaatgataaaggcgtgttgatcatctgt
gacaatcgactggtcacgcgcgattatggtggcgtgtttctcgccagtttaccgccaatc
ccacgcacgcgggatctggacgtcgtcaccacttttctacaacaattagctataactgaa
atcaatcagagagactcatga

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