Vibrio coralliilyticus RE98: IX92_00105
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Entry
IX92_00105 CDS
T03444
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
vcy
Vibrio coralliilyticus RE98
Pathway
vcy00071
Fatty acid degradation
vcy00280
Valine, leucine and isoleucine degradation
vcy00310
Lysine degradation
vcy00362
Benzoate degradation
vcy00380
Tryptophan metabolism
vcy00410
beta-Alanine metabolism
vcy00640
Propanoate metabolism
vcy00650
Butanoate metabolism
vcy00907
Pinene, camphor and geraniol degradation
vcy00930
Caprolactam degradation
vcy01100
Metabolic pathways
vcy01110
Biosynthesis of secondary metabolites
vcy01120
Microbial metabolism in diverse environments
vcy01200
Carbon metabolism
vcy01212
Fatty acid metabolism
Module
vcy_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vcy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
IX92_00105 (fadB)
00650 Butanoate metabolism
IX92_00105 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
IX92_00105 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
IX92_00105 (fadB)
00310 Lysine degradation
IX92_00105 (fadB)
00380 Tryptophan metabolism
IX92_00105 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
IX92_00105 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
IX92_00105 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
IX92_00105 (fadB)
00930 Caprolactam degradation
IX92_00105 (fadB)
Enzymes [BR:
vcy01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
IX92_00105 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
IX92_00105 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
IX92_00105 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
IX92_00105 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AIW17562
UniProt:
A0AAN0S8W6
LinkDB
All DBs
Position
1:complement(20315..22486)
Genome browser
AA seq
723 aa
AA seq
DB search
MIYQAETLQVKELHDGIAELSFCSPNSVNKLDLATLESLDKALDALNAHQGLKGLLLTSD
KDAFIVGADITEFLGLFAKEEAELDKWLQFANSIFNKLEDLPVPTISVLKGHTLGGGCEC
VLATDMRIGDKTTSIGLPETKLGIMPGFGGCVRLPRVIGADSAMEIITQGKACRADEALK
IGLLDAVVDGESLYESALATLTQAINEKLDWQQRRKQKTSALTLSKLEAMMSFTMAKGLV
AQKAGPHYPAPMKAVIAIEEGSRFARNEALEIERKYFIKLAKSEEAKALVGLFLNDQYIK
GIAKKAAKHANKQTERAAVLGAGIMGGGIAYQSALKGVPVMMKDIAQASLDLGMTEASKL
LNKRLSRGRIDGFKMAGILASITPSLHYVGIENSDVIVEAVVENPKVKAAVLSEVEQQVS
EDTVITSNTSTIPINLLAKSLQRPENFCGMHFFNPVHRMPLVEIIRGEHTSDETINRVVA
YAAKMGKSPIVVNDCPGFFVNRVLFPYFGGFSMLLRDGADFTKVDKIMERQFGWPMGPAY
LLDVVGIDTAHHAQEVMAQGFPERMGKSSRDAIDALFDANKYGQKNGSGFYSYSVDKRGK
PKKTFSDEILPILSEVCSQAQEFDDQTIIQRMMIPMINEVVLCLQEGIIASPQEADMALV
YGLGFPPFRGGVFRYLDSVGIAEFVAMAEQHQDLGAMYQVPQMLIDMAAKGETFYGTQQH
GSI
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatttaccaagccgaaaccctacaggtaaaggaattacacgacggtatcgctgagcta
agtttctgctcaccaaattctgtcaacaagctcgacctcgccacactggaatcactcgat
aaagctttggatgcgctgaacgcacaccagggtctaaaaggtctgttactgacttcagat
aaagatgctttcattgtcggcgcagatatcaccgaattcttaggcctatttgccaaagaa
gaagccgaactcgataagtggctgcaatttgctaacagcatcttcaataagcttgaagat
ttgcctgtaccaaccatttctgtgctgaaaggtcatactcttggcggcggatgtgagtgt
gtacttgctactgacatgcgcattggtgacaaaaccaccagcattggcttaccagaaact
aagctcggtatcatgccaggatttggcggctgtgtacgcctacctcgcgtcattggtgct
gacagtgcaatggaaatcatcacacaaggtaaagcttgccgcgcagacgaagcactaaaa
attggcttgctagacgctgttgtcgacggtgaatcgctgtatgaatccgcgctagcaaca
ctcacacaagcaattaatgagaagcttgattggcagcagcgccgtaaacagaaaacctct
gcgcttactctgagtaagttagaagcgatgatgagcttcacgatggcgaaaggcctagtg
gcacaaaaagcaggcccacactaccctgcaccaatgaaagcggtcatcgccattgaagaa
ggttcacgttttgcacgtaacgaagccctagagattgaacgtaagtacttcatcaaactg
gctaagtccgaagaagcgaaagcgctggttggccttttccttaacgatcagtacatcaag
ggtattgccaagaaagcggcaaaacatgccaacaaacaaactgaacgcgcagccgtgctc
ggcgcaggcattatgggtggcggtattgcttaccagtctgctctgaaaggcgtgccggtc
atgatgaaagacatcgctcaggcatctttggatctcggtatgacagaagcatccaagctg
cttaacaagcgtttgtcacgcggccgtatcgatggatttaagatggcaggtattctggca
tcaattactcctagcctgcattacgtggggattgaaaattcggatgtgattgttgaagcc
gtggtagaaaacccgaaagttaaagccgcagtattgagcgaagtagaacagcaggtcagc
gaagatactgttatcacttccaatacttcaacgatcccaattaacttgctggctaagtcg
cttcagcgcccagaaaatttctgtggtatgcacttcttcaatcctgtgcatcgtatgcct
ctcgttgagatcatccgaggtgagcacacctctgatgaaaccatcaatcgcgtagttgct
tacgcggctaagatgggtaaatcacccatcgtcgttaatgactgcccaggcttcttcgtt
aaccgcgtactcttcccgtactttggcggtttcagcatgctacttcgtgatggcgcggac
tttactaaagtcgacaaaatcatggagcgtcagtttggctggccaatgggccctgcctac
ctactggacgtggtaggtattgataccgcacaccacgcacaggaagttatggcgcaaggt
ttccctgagcgtatgggtaagtcatctcgcgatgcgattgatgctctgttcgacgctaat
aaatacggacagaagaatggcagcggtttctacagctacagcgtagacaaacgtggtaaa
ccgaaaaagacctttagtgacgagattttaccgattttgtctgaggtatgcagccaagct
caagagttcgacgatcagaccatcattcaacgtatgatgattccaatgatcaacgaagtc
gtgctgtgtttgcaggaaggcattatagcttctccacaggaagctgacatggcattggta
tacggtctgggcttccctccattccgtggcggtgtgttccgctacctagatagtgtgggc
atcgctgaatttgttgcgatggcagagcagcaccaagatcttggtgctatgtatcaggtt
ccacaaatgctgattgatatggctgccaaaggcgaaaccttctatggcactcagcaacac
ggttctatctaa
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