KEGG   Vibrio coralliilyticus RE98: IX92_00360
Entry
IX92_00360        CDS       T03444                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
vcy  Vibrio coralliilyticus RE98
Pathway
vcy03030  DNA replication
vcy03410  Base excision repair
vcy03420  Nucleotide excision repair
vcy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vcy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    IX92_00360
   03410 Base excision repair
    IX92_00360
   03420 Nucleotide excision repair
    IX92_00360
   03440 Homologous recombination
    IX92_00360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vcy03032]
    IX92_00360
   03400 DNA repair and recombination proteins [BR:vcy03400]
    IX92_00360
Enzymes [BR:vcy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     IX92_00360
DNA replication proteins [BR:vcy03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     IX92_00360
DNA repair and recombination proteins [BR:vcy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     IX92_00360
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     IX92_00360
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 HHH_5
Other DBs
NCBI-ProteinID: AIW17603
UniProt: A0AAN0VVZ0
LinkDB
Position
1:69839..72634
AA seq 931 aa
MARIPDNPLILIDGSSYLYRAFHAYPGTMSNGDIPTNAVYGVVNMLRSMMRQFASERIAV
VFDAKGKTFRDEMYPEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLICVPGVEADDVIGT
LAYQASQAGMPVLISTGDKDMAQLVDDNVTLINTMTNVVMDREGVIEKFGIPPELIIDYL
ALMGDKVDNIPGVPGVGDKTATALLQGIGSLEKLYDNLDDIAPLGFRGSKTMAKKLVDNK
EEAFLSYELATIKLDVELEETPDSLLKAEPNTDELIKLYGQLVFKSWLNELLEGGTGVVV
ADEKSGAASGAGASATASEIDTSAVTIDRSQYETILDQQAFNAWLDKLKAADVFAFDTET
DSLDYMVANLVGVSFATEEGVAAYVPVAHDYLDAPEQLDRDWVLEQLKPILEDDAQAKVG
QNLKYDASVLARYGIEMKGIKHDTMLASYVYNSVGGKHDMDSLALRFLQHSCISFEQIAG
KGKKQLTFNQIELEQASPYAAEDADVTLRLHNRLLANIEQDEKLKTIYEEVEVPLVPVLS
RIERTGVLIDDMKLAAQSQEIALRLDELEQQAFEIAEQEFNMNSPKQLQAILFEKMGLPV
VKKTPSGTPSTNEEVLQELALDYPLPKLILEYRGLAKLKSTYTDKLPKMINPETGRVHTS
YHQAVTATGRLSSTDPNLQNIPIRNDEGRRIRQAFIAPHGYKIMAVDYSQIELRIMAHLS
GDKALLDAFQQGKDIHAATAAEIIGVDIEQVSAEQRRRAKAVNFGLIYGMSAFGLAKQLG
IPRGEAQQYMDTYFERYPGVMQYMEDTRSAAAEQGYVETIFGRRLHLPEIKSRNGMRRKA
AERAAINAPMQGTAADIIKKAMLLVDEWIESQGQGRVKLLMQVHDELVFEVQESALAEIE
SKVQELMESAAQLDVPLIAEAGHGDNWDQAH
NT seq 2796 nt   +upstreamnt  +downstreamnt
atggctcgtattcctgacaacccgttgattttgattgacggctcttcttatctttaccgc
gcatttcatgcttatccgggcactatgagcaatggtgatatcccgacgaacgctgtttat
ggtgtggtaaacatgctacgcagtatgatgcgtcagtttgcctctgagcgtatcgcagtg
gtctttgatgctaagggaaaaaccttccgtgatgagatgtatccggaatacaaagccaat
cgtcctccgatgccagatgatctccgttgtcagattgaacctctgcacaatgtgattcgc
gcaatgggcttgcctctgatctgtgttccgggtgtggaagcggatgatgtgattggtacg
ctggcgtatcaagcttcgcaagcggggatgcctgtgttgatcagtaccggcgataaagat
atggcacagttggtggatgacaacgtgactctgatcaacaccatgactaatgtggtgatg
gatagagaaggcgtgattgaaaaatttggtatcccaccagagctgattatcgattatctc
gctttgatgggcgataaagttgataacatcccaggtgtaccgggtgttggtgataagacc
gcaactgcattactgcagggtatcggcagtttggagaagttgtacgacaatcttgatgac
atcgcaccgcttgggttccgtggctcgaagaccatggcgaaaaagctggtcgataacaaa
gaagaagcgtttctttcttacgagcttgccacgattaagttggatgttgagctggaagaa
acgccagactcactgctcaaggccgaaccgaataccgatgagctgatcaaactgtatggc
cagttggtgttcaaatcttggctcaatgaattactggaaggtggtacgggtgttgtcgtg
gcagatgaaaagtccggcgcagcgtcgggggctggagcctctgccacagccagcgagatc
gatacctctgcagtgacgattgatcgcagccagtacgaaaccattcttgaccaacaggca
ttcaatgcttggttagataaactcaaagcggcggatgtcttcgcgtttgataccgaaacc
gacagcctcgattacatggtggcgaatctggttggtgtgtcgtttgcgacagaagaaggc
gtcgctgcatacgtgcctgtggcgcatgattatcttgatgcgccagagcagcttgatcgc
gattgggtactagagcaattgaagccgattcttgaagatgatgctcaggcgaaagtgggg
cagaatctaaaatacgatgcgtcggtattggctcgctacggcattgagatgaaaggcatt
aagcatgacaccatgctcgcgtcatacgtttacaacagcgtgggtggcaagcatgatatg
gacagcctggcactgcgattccttcagcacagctgcatttcttttgagcagattgcgggt
aaaggcaagaagcagctgacgttcaatcagattgaactggaacaagcttcaccatacgcc
gcagaagatgctgatgtgaccctccgtttacacaatcgcttgctcgccaacattgagcag
gatgaaaagctgaagaccatctatgaagaggtcgaagtgccgctggttcccgttttatca
cgtattgaacgcacaggcgtgttgattgatgacatgaagctggccgctcagtcgcaggaa
attgcgttgcgccttgatgagttggagcagcaagcgtttgaaatcgcggagcaagagttc
aacatgaattcgccaaagcagctgcaagcgattctgtttgagaaaatgggtctgccggtt
gtgaagaaaacgccatcgggaacgccttcaactaatgaagaggttctgcaggagttggcg
ttggattacccgttgccaaaattgatcctcgaatatcgtggcttagcgaagctcaaatca
acttatactgataagctgccgaaaatgattaatcctgaaacaggccgtgtccatacgtct
tatcatcaggctgtaaccgcgactggccgtctatcttcgaccgatcctaacctgcagaat
atcccaatccgtaatgatgaaggtagacgtattcgccaggcgtttattgcaccacatggt
tacaagatcatggcggtcgattactcccagattgaattgcgcattatggcgcacctttca
ggagacaaagcgctgctagatgccttccagcaaggaaaagacattcacgcagcgacagca
gctgaaatcattggcgtggacatcgagcaggtgtcggctgaacaacgtcgtcgtgcgaaa
gcagtcaactttggccttatttatggcatgagtgcttttggtttggcgaagcagttgggc
attccacgtggcgaagcacagcaatacatggatacctactttgagcgctacccaggtgtg
atgcaatacatggaagacacacgtagtgccgcagctgaacaaggttatgtcgaaaccatc
tttggccgtcgtttgcatctgccggaaataaagtcacgcaacggcatgcgtcgtaaagcg
gcagaacgtgctgcgatcaacgctccaatgcaggggacagcagcggacatcattaagaaa
gccatgttattggtggatgaatggattgagagccaaggtcagggtcgagtgaaattgctg
atgcaggtgcacgatgaactggtcttcgaagttcaggagtcagctttagccgaaattgaa
agtaaagtacaagaattgatggaatccgccgctcagctggatgtacctttgattgcggaa
gcgggtcatggtgacaactgggatcaggcgcactag

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