KEGG   Vibrio coralliilyticus RE98: IX92_00425
Entry
IX92_00425        CDS       T03444                                 
Name
(GenBank) ATP-dependent DNA helicase Rep
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
vcy  Vibrio coralliilyticus RE98
Brite
KEGG Orthology (KO) [BR:vcy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vcy03400]
    IX92_00425
Enzymes [BR:vcy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     IX92_00425
DNA repair and recombination proteins [BR:vcy03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    IX92_00425
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 ResIII SDE2_2C
Other DBs
NCBI-ProteinID: AIW17616
UniProt: A0AAE5GLI9
LinkDB
Position
1:87237..89255
AA seq 672 aa
MKLNPNQDEAVKYVSGPCLVLAGAGSGKTRVITNKIAYLVQQCGYKARNIAAVTFTNKAA
REMKERVGQTLGKNESKGLMVSTFHTLGLNIIKREYKALGLKSGFSLFDDQDQLALLKEL
TEKQLDGDKDLLRQLLSTISNWKNDMLTPEQAKAYAQGEQQQLFAFCFDMYQKQMKAYNA
LDFDDLIALPVLLLRTNEEVRQRWQNRIRYLLVDEYQDTNTSQYELVKLIVGERGRLTVV
GDDDQSIYSWRGAKPQNLVLLGEDYPSLRLIKLEQNYRSTSRILRAANILIANNPHVYEK
SLFSEIPDGEKLKVLLAKDEEHEAERVTGELIAHKFLNRTDYRDYAILYRGNHQSRLIEK
SLMQNRVPYKLSGGTSFFARAEIKDIMAYLRVLVNPDDDNAFLRIVNTPRREIGPVTLEK
LGSYANMRGKSLFECSFEIGLEQHLSGRGLENLRRFSQWLVKIADQAERGDTVEAVRSLV
RDINYEDWLYETSASPKAAEMRMKNVSDLYSWIVADLEGDNYDQEEKTIKEVVQRLTLRD
MMERGEEDDDSDAVQLMTLHASKGLEFPYVYLIGSEEGILPHQTSIDEDNVEEERRLMYV
GITRAQRELTFTMCKERRQFGELIKPTQSRFLDELPFDDVEWEVNKKPQTQEERMAKGQA
HIANIRAMFNKK
NT seq 2019 nt   +upstreamnt  +downstreamnt
atgaaactgaaccccaatcaagatgaagccgtaaagtacgtatcaggaccatgtctggtc
ttggcgggggcgggatcgggtaaaacacgtgttattaccaataagattgcgtatttggtt
cagcagtgcggttacaaagctcgaaatattgctgcggtgacattcaccaacaaagcagca
cgtgaaatgaaagagcgtgtcggccagacgttaggcaagaacgaatcgaaaggcttgatg
gtatcgacgttccacaccttaggtctcaacattattaaacgtgaatacaaggcgttgggg
ttaaagtcaggtttttctctgtttgatgaccaagatcagcttgcactattgaaagagctg
actgagaaacagctcgatggcgataaagatttactacgccagctactcagtaccatttcc
aactggaaaaatgacatgctgactccggagcaggcgaaagcatatgctcaaggggaacag
cagcaactgtttgccttctgtttcgatatgtatcagaaacagatgaaagcctacaatgcg
ctcgactttgatgacttgatcgctttaccggttctgctgctgcgtaccaatgaagaagtc
cgtcagcgttggcagaatcgtattcgctatttattggtcgatgagtatcaggataccaac
accagtcagtacgagttggtcaaactgattgttggtgagcggggtcgcctgacggtggta
ggagatgatgaccagtcaatctattcttggcgtggtgcgaaaccacagaacttagtgtta
ttgggtgaagattacccaagtcttcgtttgataaagctggagcaaaactatcgttctacc
agccgaattctgcgcgctgccaatattttaattgccaacaacccgcacgtgtatgagaag
tcgctgttttctgaaatccccgatggcgaaaagctcaaagtgttgctggcgaaagatgaa
gaacatgaagcggagcgagtgacgggtgagctgatcgcccataagttcctcaatcgtact
gattaccgcgattacgctatcttatatcgtggtaaccatcagtctcgtctgattgaaaaa
tcgctgatgcaaaaccgagtgccttacaagctctctggcggtacctcattttttgctcgt
gctgaaatcaaagacatcatggcgtatttacgtgtgttggtgaacccggatgatgacaat
gcatttttgcgtattgtgaacacgccacggcgtgagattggcccagtaaccttggaaaaa
ctgggcagttacgccaatatgcgcggcaagagcctgtttgagtgcagttttgagatcgga
ctggagcagcacttgtctggccgtgggttagaaaatttgcgccgctttagtcagtggtta
gtcaagattgccgatcaggctgagcgaggagacactgtagaagcggtgcgttcattggtg
cgggacatcaactacgaagactggctatatgaaacctctgcgagcccaaaagcagcagaa
atgcggatgaaaaacgtctcggacctgtattcttggattgtggctgacctagaaggggac
aattatgatcaggaagaaaagaccattaaagaggtggttcaacgtctgacactgcgagac
atgatggagcggggtgaagaagatgatgacagtgatgcggtgcaactgatgaccttacat
gcgtcaaaaggtttggagtttccttatgtctacttgattggttcggaagagggcatttta
cctcaccagaccagcattgatgaagataatgtcgaggaagaacgccgtctgatgtacgta
gggatcacacgagcccagcgcgagttaacctttaccatgtgtaaagagcgccgccagttt
ggtgagttgataaagccgacccagagtcgcttccttgatgagcttccatttgatgatgtg
gagtgggaagtgaataaaaagccccagacgcaagaagagcgcatggccaaagggcaggca
cacatcgctaatattcgtgcgatgttcaataagaagtag

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