Vibrio coralliilyticus RE98: IX92_00870
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Entry
IX92_00870 CDS
T03444
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
vcy
Vibrio coralliilyticus RE98
Brite
KEGG Orthology (KO) [BR:
vcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcy03021
]
IX92_00870
Transcription machinery [BR:
vcy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IX92_00870
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
HTH_25
AAA_13
Motif
Other DBs
NCBI-ProteinID:
AIW17689
UniProt:
A0A097QPN9
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All DBs
Position
1:179455..180312
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AA seq
285 aa
AA seq
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MTNQAYPMAVVTQDSLDSYIRTVNGYPMLTAEEERGLAERLHYNGEIEAAKGLILSHLRF
VVHVARGYSGYGLPMADLVQEGNIGLMKAVKRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKIATTKAQRKLFFNLRKSKKRLGWFNNGEVETVARELGVEPSEVREMESRLAAQDA
AFEMQNDDDDSGVSYTAPMLYLEDKASDVADNVEAANWEAHTNNRLSLALSSLDERSQHI
VRSRWLEDNKSTLQELAETYSVSAERIRQLEKNAMKKLKAAVGDF
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgactaaccaagcgtatccaatggctgtagttacacaagatagcttagatagctatatc
cgcacagtgaacggctatccaatgctgaccgctgaagaggagcgtggactggctgagcga
ctacactacaacggcgaaattgaagcggcaaaaggcctgattctttcgcaccttcgtttt
gtggtgcacgtagctcgtggttactctggctatggcttgccaatggcagacttagtacag
gaaggcaacatcggcctgatgaaagcagtaaaacgctttaatccggaagtcggtgtgcgt
ttggtgtcatttgcggtgcactggatcaaagctgaaattcacgaatacgtactgcgtaac
tggcgtattgtgaaaattgcgaccactaaggctcagcgcaaattgttcttcaacctgcgt
aaatcgaagaagcgccttggctggtttaacaacggtgaagttgaaactgttgctagagag
ctgggtgttgagccatctgaagtgcgtgagatggaatctcgtcttgcggctcaggatgcg
gcatttgaaatgcagaacgacgatgatgattctggtgtttcttacacagcgccaatgctg
tacttagaagataaagcttcggatgttgccgacaatgtcgaagcggccaactgggaagcg
cacacgaacaaccgcttaagcttagccttgtcgagtctggatgagcgtagtcagcatatt
gtccgctcacgctggcttgaagacaataagtcgacgttacaggaattggcggaaacctac
agtgtctctgcagagcgtatccgtcagcttgaaaaaaatgctatgaagaagttaaaggct
gccgtcggcgacttctaa
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