Vibrio coralliilyticus RE98: IX92_01770
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Entry
IX92_01770 CDS
T03444
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
vcy
Vibrio coralliilyticus RE98
Pathway
vcy03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vcy00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
IX92_01770 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcy03019
]
IX92_01770 (rnc)
03009 Ribosome biogenesis [BR:
vcy03009
]
IX92_01770 (rnc)
03036 Chromosome and associated proteins [BR:
vcy03036
]
IX92_01770 (rnc)
Enzymes [BR:
vcy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
IX92_01770 (rnc)
Messenger RNA biogenesis [BR:
vcy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
IX92_01770 (rnc)
Ribosome biogenesis [BR:
vcy03009
]
Eukaryotic type
90S particles
RNase
IX92_01770 (rnc)
Prokaryotic type
rRNA processing factors
IX92_01770 (rnc)
Chromosome and associated proteins [BR:
vcy03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
IX92_01770 (rnc)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
RM44_endonuclase
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
AIW17831
UniProt:
A0A0A0SNV6
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All DBs
Position
1:361928..362605
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AA seq
225 aa
AA seq
DB search
MNSPIAKLEKKLGYQFNDAELINLALTHRSAHGKHNERLEFLGDSILSFVIADDLYHRFP
KVNEGDMSRMRATLVRGNTLAELGREFELGDHLKLGPGELKSGGFRRDSILADAVEAIIG
AIYLDSDIEVVRGIILSWYKQRLEAIQPGVSQKDPKTRLQEFLQGRRKPLPVYTVTNIKG
EAHNQQFTVSCEVAGVGSPVIGKGTSRRKAEQAAAELALEQLSND
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgaattctcctattgccaaactagagaaaaagctcggctatcagttcaatgatgcagag
cttattaacttagcgctgactcaccgcagtgctcatggaaaacataatgagcgtcttgag
tttctgggcgattcaattttaagttttgtcattgctgacgatctttatcaccgtttcccg
aaagtgaatgaaggggacatgagccgtatgcgtgcaacacttgttcgtggtaatacgctg
gcggagctaggtcgagaattcgaactaggagatcacttaaaattaggtccaggtgaattg
aagagtggcgggttccgtcgtgattctattctggctgacgctgttgaagctatcataggt
gcaatctacctagacagtgatattgaagtggtgcgtggcattatccttagctggtataag
caacgccttgaggcgattcaaccgggtgtttctcagaaagaccctaaaacgcgtcttcag
gagtttctacaagggcgaagaaaaccactgcctgtctacacagtgactaatattaaaggt
gaagcacacaaccagcagtttactgtgtcgtgtgaagtcgcaggtgtcggatcgcctgta
ataggtaaaggcaccagccgccgcaaggcagaacaagcggctgcggaactagcactagag
caactgagcaatgactga
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