Vibrio coralliilyticus RE98: IX92_02705
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Entry
IX92_02705 CDS
T03444
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
vcy
Vibrio coralliilyticus RE98
Pathway
vcy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vcy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IX92_02705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcy03400
]
IX92_02705
Enzymes [BR:
vcy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
IX92_02705
DNA repair and recombination proteins [BR:
vcy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IX92_02705
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
SH3_13
NAT10_TcmA_helicase
AAA_11
Viral_helicase1
UvrD-helicase
AAA_22
SLFN-g3_helicase
nSTAND3
AAA_16
CbiA
TraI_hel_assoc_N
TrwB_AAD_bind
DEAD
AAA_28
MukB
UvrD_C
T2SSE
FtsK_SpoIIIE
SRP54
DUF87
AAA_7
NTPase_1
AAA
ATPase
Motif
Other DBs
NCBI-ProteinID:
AIW18006
UniProt:
A0AAN0VX35
LinkDB
All DBs
Position
1:579838..581937
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AA seq
699 aa
AA seq
DB search
MQDLFSRLQPLASKGSIRQIDYQFARFILAQSKDEYVAFIAAVLSCELGKGHICLPLFDS
YGQPVDLAAKLGLFGEAAIELNQMLQKADWPSLLQASSLVGEQGQTSPMIFDGERLYLHR
YWHYEVVLANRLNSFGSPMILKPTDAQKLAELLNHLFARNYRYLFTAQASAQSDGSSTQV
LRQQLVCDHLDVVSSEQLDWPTIDQKLLSATKIEHLNVLDQLVPVSVCVNWQKVAAAVAL
TRRFAVISGGPGTGKTTTVTKLLAALITQAKQAGDAPVIKLVAPTGKAAARLTESIGKAV
AELPVEPGLKEQIPTDASTLHRLLGAVPNSVEFRHNQHNPLHLDILVVDEASMVDLPMMY
KLVDALPKHARLILLGDKDQLSSVEAGAVLGDICSFYQQGYSATHAGVIAQLTGYQTLAH
SSNTTATIADSLCMLQKSYRFDARSGIGQLAKAINSGSMQKVDWVWQRDFEDIARFPIDG
QHYSQMIQTLAQEYSHYLKRIGQVVVDPDTEQPETTHQRAKDALKLFAKCRLLCAVREGD
FGISGLNQRIERALNARKMIQVQDEIWYHGRPVMVVRNDHALGLYNGDIGLCLRDNSDGV
ERLKVFFELPDGSVKAVLPSRVPEHETAYAMTIHKSQGSEFEHTLMILPPEFTPILTREL
IYTGITRAKQKLSLYVDDRVLARGVKIRTERASGLVNRL
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatctcttttcgcgtcttcagcctctggcgagcaaaggttcaatccgacagatt
gattatcagtttgctcgttttattcttgctcaaagtaaagatgaatacgttgcttttatt
gcggcagtcctcagctgcgagttaggtaaggggcatatttgcttgccactgtttgacagt
tacggacagcctgtggatttggcagctaaattggggctgtttggtgaggcggctatcgag
ctaaatcaaatgctacaaaaggcagattggccatcactacttcaggcttcatctttggtc
ggggagcaagggcagacatcgccaatgatttttgacggtgaacgactttacctgcatcgc
tattggcattacgaggttgtattggcaaatcgcttgaacagctttgggtcacccatgatc
ctaaagcctactgatgctcaaaaactggcagagttgctgaatcatctgttcgccagaaac
tatcgttatctctttactgcccaagcctccgcgcaatctgatgggagttcgacacaggta
ctcagacagcagttagtctgcgatcatcttgatgtagtgagcagcgaacagctcgattgg
cctaccatagaccaaaagctccttagtgcgaccaaaatagagcatttgaacgtactggat
cagctggtacccgtgtcggtctgtgttaactggcaaaaggtagcggcagctgttgcattg
acgcgacgctttgcggtgatttctggtggtccgggtaccggaaaaaccaccacagtgacg
aaattgcttgctgccctgatcactcaggctaagcaagctggcgatgctccggtgattaag
ctcgtcgctccgacaggtaaagcggctgcgcgcctgacggaatctatcggtaaggccgta
gcagaattgcctgttgaacccgggctaaaagaacaaatcccaaccgacgccagcactttg
catcgcttgctaggcgctgtgccaaacagcgttgaattccgtcacaaccagcacaatcca
cttcaccttgatatcttagtggtggatgaagcctctatggtggatctacccatgatgtac
aagctggtggatgcactgcctaaacatgcccgtttgatactgctcggtgataaagatcag
ctctcgtcggtggaagctggggcggtgttgggagatatttgttccttttaccaacaaggc
tacagtgccactcacgctggtgtgattgctcagcttactggctaccagacactagcccac
tcctccaataccacggcgactattgctgatagtctgtgcatgctgcaaaagagctaccga
tttgatgcccgttcaggtatcggacaattagcgaaagcgatcaattccggctcaatgcaa
aaagttgattgggtctggcagcgagatttcgaagacatagcgagatttcctattgatggt
cagcactacagtcagatgattcaaacattggcacaggaatacagccattacttaaagcga
atcggacaagtggtcgtggatcccgacactgaacaaccagaaaccactcatcagcgtgca
aaagatgcgctgaagctgtttgcaaaatgtcgtttactgtgtgccgttcgagaaggggac
tttggcatctcaggacttaatcaacgcatagaacgggcattaaacgcacgtaaaatgatt
caggttcaggacgagatttggtatcatggaaggcctgttatggtggtacgcaacgatcac
gcattgggcttgtacaatggtgatattggcctttgtttacgtgataactcggacggagtt
gagcgactgaaggtctttttcgaacttcccgatggctcggttaaagctgtgcttccaagc
cgagtacctgagcatgaaacggcctacgcgatgacgattcataaatcacagggcagcgaa
tttgagcacaccttgatgatattaccaccggaatttacaccaattctgactcgtgagctt
atctacacgggcattacgcgtgcaaaacaaaaattgagtttatatgtggatgacagagtg
ttggcgcgaggggtgaagatcaggactgagagagcaagtggcttggtaaaccgtttataa
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