Vibrio coralliilyticus RE98: IX92_03880
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Entry
IX92_03880 CDS
T03444
Name
(GenBank) LysR family transcriptional regulator
KO
K10918
LysR family transcriptional regulator, transcriptional activator AphB
Organism
vcy
Vibrio coralliilyticus RE98
Pathway
vcy05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
IX92_03880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcy03000
]
IX92_03880
Transcription factors [BR:
vcy03000
]
Prokaryotic type
Helix-turn-helix
LysR family
IX92_03880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AIW18230
UniProt:
A0A097QLV1
LinkDB
All DBs
Position
1:complement(850133..851008)
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AA seq
291 aa
AA seq
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MKLDDLNLFRLVVENGSYTATSRKTMIPVATITRRIQALEEALNLRLLNRHARKLSLTEA
GERFYNECSPLLNRLTSAAEEITDECRGAAGKIRISAPSNLTKRRMMPMLNEFMKHYPDI
NIELTTSNHADQLDPTEWDVIFRVGPQRDSSLIARKISSVEDILVASPEYLKNNPTPKHA
EDLHNHSLLKGAPLLKWQLTNSNGETVVNNDKGRFQASTLDVVRSACSNGLGITLMPDAM
LKKYIEDGSLTRVLEDWSANPRDIYMLYNHKDHLPEKVRLLIDFVIAYNIH
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagatgatctcaacctttttaggctagtcgttgaaaatgggagttatactgcg
acatctcgcaagacgatgattcccgttgcaacaatcacacgacgcatacaagcgttagaa
gaggcacttaaccttaggttattaaaccgccatgctcgtaaactttcccttacggaagcc
ggtgaacgtttctacaacgaatgctctcccctacttaaccgattaacctctgcagccgaa
gagatcactgacgaatgccgaggcgctgcaggcaaaatccgcatttccgctccctcaaac
ctcactaagcgtagaatgatgcctatgctgaatgagtttatgaaacactaccctgacatc
aacattgaactaacgactagcaatcatgctgatcaacttgatccgacagagtgggatgtc
attttccgtgtcggccctcagagagattcaagcctgattgcgcgtaagataagctcagtt
gaggacatcttagttgccagccctgagtacctaaaaaacaaccctactccaaaacatgca
gaagatttgcacaatcattccctattaaaaggcgcacctcttcttaaatggcaactcacc
aacagcaacggtgaaaccgtcgtcaacaatgacaaaggacgcttccaagcaagtactctg
gatgtcgtacgcagcgcgtgttccaacggattagggatcacccttatgccagatgccatg
cttaaaaagtacattgaagatggtagtttaacgcgtgtactcgaagactggagtgcgaac
ccccgcgatatctatatgctttacaatcataaagatcacctaccggaaaaagtacgctta
cttatcgactttgttattgcctacaatattcactag
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