Vibrio coralliilyticus RE98: IX92_04045
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Entry
IX92_04045 CDS
T03444
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
vcy
Vibrio coralliilyticus RE98
Brite
KEGG Orthology (KO) [BR:
vcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcy03032
]
IX92_04045 (ihfB)
03036 Chromosome and associated proteins [BR:
vcy03036
]
IX92_04045 (ihfB)
03400 DNA repair and recombination proteins [BR:
vcy03400
]
IX92_04045 (ihfB)
DNA replication proteins [BR:
vcy03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
IX92_04045 (ihfB)
Chromosome and associated proteins [BR:
vcy03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
IX92_04045 (ihfB)
DNA repair and recombination proteins [BR:
vcy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
IX92_04045 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Glycos_trans_3N
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HU-DNA_bdg
DUF4777
Coagulin
Motif
Other DBs
NCBI-ProteinID:
AIW18261
UniProt:
A0A097QLS2
LinkDB
All DBs
Position
1:886910..887191
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AA seq
93 aa
AA seq
DB search
MTKSELIERLCAEQTHLSAKEIEDAVKDILEHMASTLETGDRIEIRGFGSFSLHYREPRV
GRNPKTGEKVELEGKYVPHFKPGKELRERVNLD
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgactaagtctgaactgattgagagactctgcgctgagcaaacccatctttcagcgaaa
gagattgaagatgctgtgaaagacattttagagcatatggcttcgacactagaaactggc
gatagaatcgaaattcgtggattcggtagtttctctctgcattaccgcgagcctcgtgta
ggccgaaaccccaaaacgggcgagaaagtagagctggagggcaaatacgtccctcacttt
aaaccaggcaaggaattacgagagcgcgttaacctcgactaa
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