Vibrio coralliilyticus RE98: IX92_04980
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Entry
IX92_04980 CDS
T03444
Name
(GenBank) exonuclease
KO
K09953
lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
vcy
Vibrio coralliilyticus RE98
Pathway
vcy00540
Lipopolysaccharide biosynthesis
vcy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vcy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
IX92_04980
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vcy01005
]
IX92_04980
Lipopolysaccharide biosynthesis proteins [BR:
vcy01005
]
Lipid A
IX92_04980
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxR
DUF1761
Motif
Other DBs
NCBI-ProteinID:
AIW18434
UniProt:
A0AAN0S9Q4
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Position
1:complement(1119602..1120603)
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AA seq
333 aa
AA seq
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MNLLRTLPLILLASSAVASERSTVSFSIDNDGVFGVDQDYTNGLFLTYTSGAVTPNWLTN
PMSLSFWGGASLDKYEFTLGHKMYTPSDINATTPMVNDRPYAGYLHAEFNYISLHPQQAQ
RFNLTLGTTGESSLADQAQDIVHGITGSDEPRGWAYQVDDEFVGSLGYLSHFNLWRERAI
ANTDWEISNVSEVNAGNFRSDVSTGFMFRWGTDLAGSMGAANIDNENPFRAGMLGASQGG
WFIFGGIEARYRFNDITIEGDRSGVVDYANRNGENPSIYDVTLEEKQASAVAGFAWYNEH
FGATVTATAKTPDYKEAKDSMYGTGGLALYAFF
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgaacctattacgcactcttcctttgatactgttggcctcaagtgctgtagcttccgag
cgctcaaccgtatcgttttcaattgataatgatggcgtatttggtgtcgatcaggattat
accaacggactgtttctcacctatacctctggcgctgttactcccaactggttaaccaac
ccgatgagcttatcattctggggcggcgcctctctggacaagtacgaatttacacttggc
cacaaaatgtatacaccgtcagacattaatgccaccacaccaatggtaaatgaccgacct
tatgctggttatctccatgctgaatttaactacatcagccttcatcctcagcaagcgcaa
cgtttcaatcttacactaggtacgacaggtgaaagctcactcgcggatcaagcacaagat
atcgttcacggaattacaggatctgatgaacctcgtggttgggcatatcaggtagatgac
gagtttgttggtagccttggttatcttagccacttcaatctttggcgagaacgcgccatt
gcaaatacagattgggagatttcaaacgtttccgaagtgaacgctggcaatttccgcagt
gatgtatcaacgggcttcatgttccgttggggaacagacttagcgggaagcatgggagcg
gcaaacattgataatgaaaacccattccgcgcaggtatgctaggcgcttcacaaggtggt
tggtttatatttggtggtattgaagctcgctaccgctttaacgacatcacaattgaaggc
gaccgctcgggcgtggtcgactacgctaatcgcaacggtgaaaacccaagtatctatgac
gtaacactagaagaaaaacaagccagcgcggtggctggctttgcttggtataacgagcat
tttggtgcaaccgttacggctacagcgaaaactcctgactacaaagaagcaaaagattca
atgtacggcacaggtggcctcgcattgtatgctttcttctaa
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