Vibrio coralliilyticus RE98: IX92_06255
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Entry
IX92_06255 CDS
T03444
Name
(GenBank) exonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
vcy
Vibrio coralliilyticus RE98
Pathway
vcy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vcy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
IX92_06255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcy03400
]
IX92_06255
Enzymes [BR:
vcy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
IX92_06255
DNA repair and recombination proteins [BR:
vcy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
IX92_06255
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IX92_06255
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IX92_06255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AIW18671
UniProt:
A0AAN0SCR1
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All DBs
Position
1:complement(1372302..1373726)
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AA seq
474 aa
AA seq
DB search
MQQAHQPTFFFFDYETWGTSPAKDRPSQFAGVRTDMDFNIIGEPLVIYCQPPSDYLPSPE
AALITGITPQTAASKGLPEPEFIAKIHEQLSTPNTINLGYNSIRFDDEVTRYTCYRNFID
PYAWSWQNGNSRWDLLDVMRACHALRPEGVNWPENEEGFISFKLEHLSVANGIEHENAHD
AMADVIATIEMAKKVKAAQPKLFDYFLSMRHKRKLNELVDIVNMTPLMHVSGMLGRECNY
TSWVVPVAWHPTNQNAVIVVDLAKDPQPLLDLDVEQLNERLYTKHSELGPDELPVPIKLV
HLNKCPILAPAKTLTAENAANIGIDREKCLQNLERLRQHPEIREKLNSLYSIEREYEKSD
DVDTMLYDGFFSPAAKQSMDIIRETEPKNLSALDISFSDDRIAPLLFRYRARHFPWTLDE
SEQQKWAAHSREYFESRIEDYMLNLENLVHEHESDEKKIAILKSVYQYVQKLVS
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaagcgcatcaacctacgtttttcttttttgattatgaaacgtggggaaccagc
ccagcaaaggacagaccgtcccagtttgcgggtgtacgcaccgacatggatttcaatatc
atcggtgagcctcttgttatctactgccaaccaccttcagattatcttccatcacccgaa
gccgcgcttatcactggtatcacacctcagacggcggcaagtaaagggttacctgagccg
gaatttattgccaaaattcatgagcagttgtccacgccaaacaccatcaacttaggttac
aacagcattcgatttgatgacgaagtaacgcgatacacctgctatcgaaatttcatcgat
ccgtatgcgtggagctggcaaaacggcaactctcgctgggacttacttgatgtcatgcgc
gcctgtcacgcccttcgcccagaaggtgttaattggccagagaatgaagaaggttttatc
agctttaagctagagcacttatccgttgccaatggcattgagcacgagaatgcacacgat
gccatggctgacgttatagcaacgattgaaatggctaaaaaggtgaaagccgctcagcct
aagctctttgattatttccttagcatgcgccacaagcgcaaactgaacgaactcgtcgat
atcgtgaatatgacaccgcttatgcacgtatcgggtatgctggggcgcgaatgcaattac
actagctgggtggttccggtcgcttggcatccaaccaaccagaatgcggtgattgttgtc
gatttagcgaaagaccctcagccgttgttggatttagatgtagaacaacttaatgagcgt
ctctacaccaaacattctgaacttggcccagacgaactgcctgtaccaatcaaacttgtc
catctcaacaagtgccctattttggctccagccaaaacattaactgctgagaatgcagct
aacataggcattgacagagaaaaatgcttacaaaaccttgagcgactaagacagcaccct
gagattagagaaaaactcaattcgctatacagtatcgagagagaatacgaaaagagcgat
gatgttgatactatgctttacgatggtttcttctctcctgcggcaaagcaatcaatggat
atcatacgagaaactgaaccaaagaatctttccgcccttgatatctcattcagtgacgac
agaattgctccgcttctattccgctatcgcgccagacattttccgtggacattggatgag
agtgaacaacaaaaatgggcagcacacagccgcgaatacttcgaaagtcgaatagaagac
tacatgttgaatttggaaaacttagttcacgagcatgagagtgacgaaaaaaagatagct
atcttaaaatctgtttaccaatacgttcaaaagctagtatcttaa
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