Vibrio coralliilyticus RE98: IX92_08210
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Entry
IX92_08210 CDS
T03444
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
vcy
Vibrio coralliilyticus RE98
Brite
KEGG Orthology (KO) [BR:
vcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcy03032
]
IX92_08210
03400 DNA repair and recombination proteins [BR:
vcy03400
]
IX92_08210
Enzymes [BR:
vcy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
IX92_08210
DNA replication proteins [BR:
vcy03032
]
Prokaryotic type
DNA Topoisomerases
IX92_08210
DNA repair and recombination proteins [BR:
vcy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IX92_08210
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
DUF6674
ApbA
Motif
Other DBs
NCBI-ProteinID:
AIW19033
UniProt:
A0AAE5EPU1
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All DBs
Position
1:complement(1810552..1813194)
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AA seq
880 aa
AA seq
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MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT
NIPPHNLTEVIDGCLAYINNEEITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKI
YMRSKAEIEADKNGKETIVVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDGM
RIVIECKRDAVGEVVLNNLYANTQLQTTFGINMVALNNGQPQLFNLKDMLKCFVDHRREV
VTRRTIFELRKARERAHILEGLALALANIDEIIELIRRAPTPAEAKEGLVARGWDLGNVA
AMLERAGTDAARPEWLEPQFGIRDGQYFLTEQQAQAILDLRLQKLTGLEHEKILDEYKQL
LEEIAELMHILASTERLMEVIREELEAVRDGFGDARRTEITAAIHDIDMEELIAREDVVV
TLSHEGYVKYQLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILCFSTRGKTYR
LKVYQLPQASRTARGKPIVNILPLEENERITAILPVSEFSPEKFIFMATGDGTVKKTSLD
QFANVRSNGLIAVNLREDDSLIGVDITDGDSDIMLFSKAGKVVRFSEDKVRAMGRTAAGV
RGMKLADDDQVVSLIVPSNEGDILTVTQNGYGKRTELAEYPTKGRATQGVVSIKVSERNG
SVVGAVQVEEGDEMMMITDAGTLVRTRVAEVSQVGRNTQGVTLIRTAEDENVVGLQRIDE
VEEADLPEGEEVEGQEGEVSEAAPESTPDADVDTNADEQD
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatctagctaaagagatcacgcccgtaaacattgaagatgagcttcgaggttcg
taccttgactatgcgatgtccgttatcgttggtcgtgctcttccagatgtgcgtgatggc
ctaaagcctgtacaccgccgcgttttgttcgcgatgaatgtactaggtaatgactggaat
aaaccatacaaaaaatctgcccgtgtagttggcgacgtaatcggtaaatatcaccctcac
ggtgatagcgctgtgtacgacactatcgtacgtatggctcagccgttctcactacgttac
atgcttgttgatggccaaggtaactttggctccatcgatggtgactcagcggcggcaatg
cgttataccgaagtccgcatggcgaaaatcgcccatgaacttctggctgacctagacaaa
gaaactgtcgattacgtacctaactatgatggtacggagcaaatcccggcagttctcccg
acaaaaattcctaacttactggtgaatggtgcttctggtatcgcggtaggtatggcaacc
aacattcctccgcacaacttgactgaggtaatcgatggctgtctggcttacatcaataat
gaagagatcactattgatgagctaatggattatattcctggtcctgatttccctacggca
gcgcttatcagtggtcgtaaaggcattgtagacgcgtacaaaacaggtcgcggtaagatc
tacatgcgttctaaagcggaaatcgaagcagacaagaatggcaaagaaaccattgttgtc
acagagattccataccaggttaacaaagctcgcctaatcgaaaaaattgctgagctggtt
aaagataagaaagttgaaggcatcagtgcactacgtgacgagtctgataaagacggtatg
cgtattgtcatcgaatgtaagcgtgatgcggttggtgaagttgttctaaacaacttgtac
gctaatactcaactacagacgactttcggtatcaacatggttgcgctgaacaatggtcag
ccacaactatttaacctgaaagatatgctgaagtgcttcgttgaccaccgccgtgaagtg
gtgactcgtcgtactatcttcgaattacgcaaagctcgtgaacgtgctcatatccttgaa
ggtttggcacttgcactagcaaatatcgatgaaatcattgaactgatccgtcgcgctcca
acaccagctgaagccaaagaagggctagtagctcgcggttgggacttaggcaatgttgca
gcaatgcttgaacgcgcgggtacagatgcggctcgcccagagtggctagagcctcagttt
ggtattcgtgatggtcagtacttcctgactgagcagcaagcacaagcgattctagatctt
cgtctacagaaactgaccggtctagagcacgagaagattcttgacgagtacaaacagctt
ctagaagaaatcgcagagctaatgcacatccttgcaagcactgagcgcttgatggaagtg
atccgcgaagagcttgaagcggttcgtgatggtttcggcgatgcacgtcgcacagaaatc
actgctgcaatccatgatatcgacatggaagagcttattgctcgcgaagacgttgttgta
acgctttctcacgaaggttacgttaagtaccagctactaagcgactacgaagctcagcga
cgtggtggtaaaggtaagagtgcaaccaagatgaaggaagaggattacatcgagcgtctg
cttgttgctaacactcatgacaacatcctatgtttctctacccgtggtaaaacatatcgc
ttgaaggtataccaactaccgcaagctagccgcaccgcacgtggtaaaccaatcgtgaac
attcttccgttagaagaaaatgagcgtatcacagcaattctacctgtttctgaattcagc
ccagagaagtttatctttatggcaacgggtgatggaacggttaagaagacttctctcgat
cagtttgcgaacgtacgttctaatggcttgattgcggttaacctgcgtgaagatgactca
ctgattggtgttgatatcaccgatggtgatagtgacatcatgctgttctctaaagcaggc
aaagttgttcgctttagcgaagataaggttcgtgccatgggtcgtactgcggcaggtgta
cgtggtatgaagctggctgatgatgatcaggttgtttcactgattgttccttctaacgaa
ggtgacattctgacagtgacgcaaaatggttacggtaagcgtacagagctggccgagtat
ccaacgaaaggtcgtgcaactcagggcgttgtgtctatcaaggtttctgagcgtaacggt
agtgtcgttggcgcggtacaggtagaagaaggcgacgagatgatgatgatcaccgacgct
ggtactctagtccgcacacgcgtagcggaagttagtcaagttggtcgtaacacacaaggt
gttactcttatccgtactgctgaagacgaaaacgttgtaggtttgcagcgtattgatgaa
gtggaagaagctgatttgcctgaaggcgaagaagtagaaggtcaggaaggtgaagtatct
gaagccgctccagaatctacaccagacgctgatgtcgatactaacgcagacgagcaagac
taa
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