Vibrio coralliilyticus RE98: IX92_08330
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Entry
IX92_08330 CDS
T03444
Name
(GenBank) carboxylate--amine ligase
KO
K19789
DNA repair protein RadD
Organism
vcy
Vibrio coralliilyticus RE98
Brite
KEGG Orthology (KO) [BR:
vcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcy03400
]
IX92_08330
DNA repair and recombination proteins [BR:
vcy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
IX92_08330
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_22
SLFN-g3_helicase
AAA
DUF7577
DZR
zf-tcix
Zn_ribbon_3
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AIW19056
UniProt:
A0AAN0VY24
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All DBs
Position
1:1842000..1843739
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AA seq
579 aa
AA seq
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MYTLRPYQADSVKAVIHYFRKHSSPAVLVLPTGAGKSLVIAELARLAKGRVLVMAHVKEL
VEQNHAKYEGYDLKGSIYSAGLGRKETDQQVVFASVQSVVRNLDDFKNQFSLLVIDECHR
VPDNENTSYQKVISHLRELNPGIKVLGLTATPYRLGMGWIYQYHTRGLVRTEEPRFFRDC
IFELPIRYLLDENFLTPARMMDAPVLSYDFSQLKPATTGRYKEAELDMVIDKAKRATPQI
VEQIIHLAKDKQGIMVFAATIRHAQEIYGLLPEGQTALVIGDTPTPERDTIIQDFKDRKI
KYLVNVSVLTTGFDAPHVDLIAILRPTESISLYQQIVGRGLRLSPGKEECLVLDYAGNSY
DLYQPEVGDAKPDSDSEIITIPCPACGFNNNFWGKLDNNGFLIEHYGRKCQGFFEDEETG
EREHCNYRFRAKYCGECGADNDIAARICHECDATLVDPDKKLKEALNLKDALVFECLSMD
LSVHKDDKGKSSLKVSYVGENQAQVHEFWSLTTKKQKQTFKDMFVRPHLADKHRPFNDAS
PTKVVNNQHRFRPPQFVIARKAGRFWKMRDKIFEDELTN
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtatacactccgcccataccaagccgactcggtgaaagccgttattcactatttccgt
aaacactccagcccagccgtccttgtgctaccaactggagcaggaaaaagtctggttatt
gctgaactcgccagactggctaaaggtcgggtgttggtcatggcgcacgtcaaagagctg
gtggaacaaaaccacgctaaatacgaggggtacgatctcaaagggtcaatctactctgcg
ggtttaggccgtaaagagactgaccaacaagtagtgttcgcatcagtgcagtctgtggtc
agaaatcttgatgacttcaagaatcaattctcgctactggtgatagatgaatgccaccgc
gtgccggataacgaaaacaccagctaccaaaaagtgatttctcacctgcgtgagttgaat
cccggaatcaaagtgctcggtttgaccgccacaccttaccgacttggtatgggatggatt
taccagtatcacacgcgcggcctggtcagaacagaagagccaaggttctttcgagattgc
attttcgagctgcctattcgttacttacttgatgaaaatttcctcacccctgctcgcatg
atggacgcccccgtactgagctatgacttctcacagctcaaacccgcaaccacaggccgc
tataaagaagcggagctggacatggtgatcgacaaagccaaacgggcgacacctcaaatt
gtcgagcaaatcattcacctcgctaaagacaaacaaggcatcatggtcttcgcggcaacg
attcgacatgctcaagaaatctatggtttgcttcctgagggccaaactgcgcttgtgatt
ggagacaccccaacacctgagcgcgacaccatcatccaagattttaaagaccgtaaaatt
aaatacttggttaatgtctctgtgttaaccacaggatttgatgcccctcatgtcgacctg
atagcaattctgcgaccaacagaatcaatcagtttgtatcagcagattgttggacgaggg
ctgcgtctttctccgggcaaagaagagtgtctggtactggattatgcaggcaacagctac
gatctctatcagccggaagtgggtgatgccaaacctgactccgacagcgaaatcatcacc
atcccctgcccggcttgtggcttcaacaacaacttctggggaaagctggataacaatggc
ttcttaattgagcattacggtcgaaagtgtcagggctttttcgaagacgaagagactggt
gaacgagagcattgtaattatcgtttccgcgccaaatactgcggggaatgcggcgcagac
aatgacattgctgcgcgaatttgtcacgaatgcgatgccaccttagtggatcccgacaag
aagcttaaagaggcgttaaacttaaaagacgccctggtattcgagtgcctgtcgatggat
ttgagtgttcacaaagatgacaaaggcaaaagtagcctcaaggtctcttatgtgggggaa
aaccaagctcaggtgcacgaattctggtctttaacgaccaagaaacagaagcaaacattc
aaagatatgtttgttcggcctcatctcgctgacaaacatcgtccgtttaacgatgcttct
ccgaccaaggtggtaaataatcagcatcgttttaggccacctcagttcgtgatcgcgcgt
aaagctgggcgattctggaaaatgcgtgacaaaatttttgaggatgagctaaccaactag
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