Vibrio coralliilyticus RE98: IX92_10115
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Entry
IX92_10115 CDS
T03444
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
vcy
Vibrio coralliilyticus RE98
Brite
KEGG Orthology (KO) [BR:
vcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcy03032
]
IX92_10115
03400 DNA repair and recombination proteins [BR:
vcy03400
]
IX92_10115
Enzymes [BR:
vcy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
IX92_10115
DNA replication proteins [BR:
vcy03032
]
Prokaryotic type
DNA Topoisomerases
IX92_10115
DNA repair and recombination proteins [BR:
vcy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IX92_10115
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Topo_Zn_Ribbon
TOP1_ZnF
Toprim
zf-C4_Topoisom
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AIW19388
UniProt:
A0A7Y3YZ85
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Position
1:complement(2228056..2230683)
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AA seq
875 aa
AA seq
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MGKSLVIVESPAKAKTINKYLGKDFIVKSSVGHVRDLPTAGQSTGQKAAAVSTKGLSVEE
KARIKKEKDRKALIKKMGIDPFNGWEANYQVLPGKEKVVAELQKLAKDADSVYLATDLDR
EGEAIAWHLREIIGGDEERYKRVVFNEITKNAIQQAFQKPGELSMDGVNAQQARRFMDRV
VGFMVSPLLWKKVARGLSAGRVQSVAVKLLVEREREIKAFVPEEFWDIHADTKTANKTDF
RLQVAQKDGVAFKPSNEAETQSAIAVLEKAAYEVCKREDRPTSSKPSAPFITSTLQQAAS
TRLGYGVKKTMMLAQRLYEAGYITYMRTDSTNLSAEAVETVRGFIGDEYGDAYLPAKPNV
YGSKEGAQEAHEAIRPSDVAVKADDLKGMEADAHKLYSLIWNQFVACQMTPAKYDSTTVS
VKAAEYTLKAKGRILKFDGWTRVQRPLGKNEDQILPAVQVGDKVDLIQLDPKQHFTKPPA
RFTEAALVKELEKRGIGRPSTYASIISTIQDRGYVKVEQRRFYAEKMGEIVTDRLDDSFH
ELMNYEFTSRMEEKLDQIAEGEANWKKVLDNFFGDFTGDLEKAEQDEDHGGMKPNHIVYT
DIECPTCSREMGIRTASTGVFLGCSGYALPPKERCKTTINLGDEEGIINVLEEDVETAAL
RAKKRCPICETAMDAYLIDDKRKLHVCGNNPNCDGYIVEHGEYKVKGYDGPVVECDKCGS
DMVLKNGRFGKYMDCTSETCKNTRKILKNGEVAPPKEDPVHIPELPCENSDAYFVLRDGA
SGLFLAASTFPKSRETRAPLVEELVRFKDRISPKFHYLTTAPEKDPDGLPMVVRFSRKSK
ENYVRSEVDGKPSGYTALYIDGKWEITDKRKKSAK
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagtcactcgttattgtggagtcgccggctaaggctaaaaccatcaataagtat
ttaggtaaggactttattgttaagtccagtgtgggtcacgtgcgcgatctacctaccgca
ggtcagagtaccggccagaaggcagcggctgtctctacgaaaggtttgagtgttgaagag
aaagctcgaatcaagaaagaaaaagaccgcaaagcgctgatcaaaaaaatgggcatcgac
ccatttaacggctgggaagcgaattatcaggtcttgcctggtaaagaaaaagtggttgct
gagctacagaagctcgcgaaagacgcagatagcgtctatctcgcaaccgatttggatcgc
gagggagaagctatcgcttggcaccttcgtgagatcatcggtggcgatgaagagcgatac
aaacgagttgtctttaacgaaattactaagaacgcgattcaacaagctttccagaaaccg
ggtgagcttagtatggatggcgttaacgcccaacaggcacgccgctttatggatcgtgtt
gtgggctttatggtttcaccactgttgtggaaaaaggtcgcgcgtggcctgtctgctggc
cgtgttcagtcggtggcggtaaaactattggtggagcgtgagcgcgaaatcaaagcgttt
gttccagaagagttttgggatattcacgcggatactaaaactgctaacaaaacggatttc
cgccttcaggttgcccagaaagatggtgtggcatttaagccgtcgaatgaagctgaaacg
cagtcagcgattgctgtgctggaaaaagcagcgtacgaagtttgcaaacgtgaggaccgc
ccaacgtcaagcaagccttctgctccgttcattacgtcaacgcttcagcaagcagccagc
actcgtttaggttacggcgttaagaaaacgatgatgttagctcagcgtctgtatgaagcg
ggttatatcacgtatatgcgtaccgactcgacgaatttgagcgcagaagctgtagaaacc
gttcgtggattcattggcgatgagtacggtgatgcttaccttccggctaaacctaatgtg
tatggcagcaaagaaggtgcacaggaagcgcacgaagcaatccgaccttcagatgtggca
gttaaagctgacgatctgaaaggcatggaagcggatgcgcataaactgtattcacttatc
tggaatcagtttgtcgcgtgtcagatgacacctgcaaagtatgattctacgacagtgagt
gtcaaagctgctgagtacacgcttaaggccaaaggccgcattcttaagtttgatggttgg
actcgtgttcagcgtccactaggtaagaatgaagaccagatcctgcctgccgttcaggtt
ggtgacaaggttgatttgattcaattagatcctaaacagcactttaccaaaccacctgca
cgtttcactgaagcggctttggttaaagagcttgagaagagaggcattggccgtccgtca
acgtatgcgtctatcatttcgaccattcaggatcgtggttacgttaaagttgaacaacgt
cgattctacgctgaaaaaatgggtgaaatcgtaacggatcgcttagatgatagcttccat
gagttgatgaactatgagtttacgtctcgcatggaagaaaagcttgaccaaattgctgaa
ggtgaagcgaactggaagaaggttctggataacttctttggtgactttactggagatctg
gaaaaagcggagcaggatgaagatcatggtggcatgaagccaaaccatatcgtctacacc
gatatcgagtgtccaacttgttctcgtgaaatgggtatccgaacagcatcgacaggtgta
ttccttggatgttcaggttatgcattaccaccaaaagagcgttgtaagaccaccatcaat
ttgggtgacgaagaaggcatcattaacgttttagaagaggacgttgaaacagcagcactt
cgtgcgaaaaagcgttgtccgatttgtgaaaccgcaatggatgcttacctgatcgacgat
aagcgtaagctacacgtgtgtggtaacaaccctaattgtgatgggtacatcgttgagcat
ggcgagtacaaggtgaaagggtacgacggccctgtcgttgagtgtgacaagtgtggcagt
gacatggttctaaagaatggtcgctttggtaaatacatggattgtactagcgagacatgt
aagaacacgcgtaagatccttaaaaacggtgaagtcgcgccgcctaaagaagatcccgtt
catattcctgagttaccatgtgaaaactcagatgcatactttgtattacgtgatggtgct
tctggtctgttcttggcagcaagtactttccctaaatcgcgtgaaactcgtgctcctctt
gtagaagagttggttcgatttaaagatcgtatttctccgaaattccattatctgacaaca
gcgcctgaaaaagatccagacggtcttcctatggtagtgcgtttcagccgcaaatcgaaa
gagaactatgttcgatctgaggttgatggcaaaccatcaggctacacagcgttgtacatc
gatggtaaatgggaaattaccgataagcgtaagaagtccgcaaagtaa
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