Vibrio coralliilyticus RE98: IX92_10600
Help
Entry
IX92_10600 CDS
T03444
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
vcy
Vibrio coralliilyticus RE98
Pathway
vcy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vcy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IX92_10600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcy03400
]
IX92_10600
DNA repair and recombination proteins [BR:
vcy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IX92_10600
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IX92_10600
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
UvrD-helicase
AAA_22
UB2H
Motif
Other DBs
NCBI-ProteinID:
AIW19483
UniProt:
A0A2A2MQK0
LinkDB
All DBs
Position
1:complement(2324461..2326491)
Genome browser
AA seq
676 aa
AA seq
DB search
MSKVFDLVSDYQPSGDQPTAINQLLEGLDSGLAHQTLLGVTGSGKTFTLANVIAQAQRPA
ILLAPNKTLAAQLYGEMKSFFPNNAVEYFVSYYDYYQPEAYVPTTDTFIEKDASVNAHIE
QMRLSATKALLERKDAIIVASVSAIYGLGDPQSYLQMMLHVRRGDVMDQRDILRRLAELQ
YSRNDVAFERGQFRVRGEVIDVFPAESDQDAVRIEMFDDEIDCISIFDPLTGVVKQRDLP
RFTIYPKTHYVTPRDKILDAIENIKVELESRKKHLLDNNKLLEEQRISQRTQFDIEMMTE
LGFCSGIENYSRYLSGRSEGEPPPTLFDYLPHDGLLVIDESHVTVPQIGAMFKGDRSRKE
TLVEFGFRLPSALDNRPLKFEEFESLAPQTIFVSATPGNYELEKSDGEVADQVVRPTGLL
DPELEVRPVATQVDDLLSEIRIRSAKDERVLVTTLTKRMAEDLTEYLTEHDVRVRYLHSD
IDTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTI
GRAARNISGKAILYADSVTKSMHKAMGETNRRREKQQAYNDKMGIEPQALKRNIKDIMEL
GDIAKSKKQRTNKQVPLSKVAEPSQSYNVMTPQQLEKEISKLEAQMYQHAQDLEFEAAAE
KRDQIEKLRQQFIVNS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagtttttgatttggtttcggattaccaaccgtcaggtgaccagccaacagcg
attaaccagttattggaggggttggattcaggtctcgctcatcaaactttactgggggtt
actggctcaggtaaaacttttacccttgccaatgtgatagcacaggctcagcgccctgcg
attctgctcgcaccgaataaaactctggctgcgcagctttatggtgagatgaaatcgttt
ttccctaataacgctgtcgagtacttcgtctcttactacgattattatcagcctgaagcc
tacgtaccgacgaccgatacatttatagagaaagatgcctctgtaaacgcccacattgaa
caaatgcgcctgtccgcgaccaaagccttacttgaacgcaaagatgccattattgtggct
tctgtttccgcaatttacggtctgggtgatcctcagtcttatctacaaatgatgttgcac
gtacgccgcggggatgtgatggatcagcgagatattttgcgccgtctggctgaattgcaa
tatagccgcaacgatgtggcatttgagcgaggacagttccgtgttcgtggtgaagtgatc
gatgttttcccggcggaatccgatcaagatgcggttcgtattgaaatgtttgatgatgaa
atcgactgtatcagtatcttcgacccactgacgggtgtggtcaagcagcgcgatttacct
cgttttaccatctatccgaaaacgcactatgttacgccaagagataagatcttggatgcg
attgaaaatattaaggttgagctggaaagtcgcaaaaagcatttgttggataacaacaag
ttacttgaagagcagcgtatttctcagcggactcaatttgatattgaaatgatgacagag
cttggcttctgctctggtatcgaaaactactctcgctacctcagtggtcgcagtgagggc
gagccgccaccgaccctatttgattacttgccccatgatggtttgttagtgatcgacgaa
tctcacgtaaccgtgccgcaaattggcgctatgttcaaaggtgaccgttcacgtaaagaa
acgctggtggaatttggcttccgtttgccttctgctttggataaccggccgctcaaattc
gaagagtttgaatctctcgcaccacaaaccatttttgtatccgcaacgccaggtaactac
gagctagagaaatcagatggcgaggtggctgatcaggtcgttcgtccaacaggtctgctt
gatcctgaattggaagttcgtccagtggcgactcaggtggatgatctgctatccgaaatc
cgtattcgatctgctaaggacgaacgtgtgttggtcaccacgctaacaaaacgtatggca
gaagatttaactgagtacctgacggaacatgacgtacgtgttcgttatctccactctgat
atcgacacggttgaacgtgtggaaattattcgagatctgagactgggtgaatttgacgtt
ttggtcgggatcaacttgctgcgagaaggtttggatatgccggaagtgtcgttggtcgct
attctggacgctgacaaagaaggtttcctacgttctgagcgttcgctgattcagactatt
ggtcgtgcggcacgtaatattagcggtaaagccattctttatgccgatagtgtaacgaaa
tctatgcacaaggcgatgggagaaaccaaccgtcgtagagagaaacaacaagcctataat
gataagatgggcatcgagccgcaggcactgaaacgtaatattaaagatattatggaactt
ggcgatattgctaagagcaaaaaacaacgaactaataagcaggttccgttgtccaaggtc
gcagagccgtcccagtcttacaatgtgatgacaccgcaacagcttgaaaaagagattagc
aagttggaagcacagatgtatcagcatgctcaggatctggaatttgaagcggcggctgag
aaacgagatcaaattgaaaaattgcgtcagcagttcattgtgaatagctga
DBGET
integrated database retrieval system
