KEGG   Vibrio coralliilyticus RE98: IX92_10895
Entry
IX92_10895        CDS       T03444                                 
Name
(GenBank) ATPase AAA
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
vcy  Vibrio coralliilyticus RE98
Pathway
vcy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vcy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    IX92_10895
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vcy03400]
    IX92_10895
Enzymes [BR:vcy01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     IX92_10895
DNA repair and recombination proteins [BR:vcy03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     IX92_10895
SSDB
Motif
Pfam: AAA_30 AAA_19 Viral_helicase1 HHH_RecD2 UvrD_C_2 SH3_13 AAA_11 AAA_22 TraI_hel_assoc_N UvrD-helicase PhoH Helicase_RecD PIF1 AAA_16 AAA_14 Herpes_Helicase nSTAND3 SLFN-g3_helicase RsgA_GTPase T2SSE DUF6469 AAA_28 AAA_7 AAA ABC_tran
Other DBs
NCBI-ProteinID: AIW19539
UniProt: A0AAN0SC19
LinkDB
Position
1:2380608..2382773
AA seq 721 aa
MNSALHEDQMRVTSIPYRSTKIVIFSGVPLAKDSYKTNSGKYYITIKADPDSIPVLPTLG
QHWSVKGARQIENMEMGDYVMQQHTYESPKHIECTLPETGEQLIRFIAKENDFKGIGESK
ARALWQLLGKNFHATLRNDTPESRKRLTSILSDDSVEALFKGYAKYKNLAHSNWMSEHNT
PASVQQRLLKHHGEASIEVIKDSPYALMGFGLSFSAIEDIIKVTDFKSDVAKDDPRRLSA
ALEMAIRKEIEKGHTYTTHANVRHYLNKLLKDKTLVTQAFQSGHDKAQYILNPDTGAYHP
TAQLLMESVVAKRLNTLIKRNDLFDENANAAYCSAAAELPYNLTSKQIEAVTTCLDNSVS
CITGGAGTGKTTVLRTALRAYHQLEYEIHAVALSGRAAMRLHESIGFVTSTIAKLLREDP
IQPSVDEPNHLLVIDEASMIDLPTMYRLVNHIHPSVRLIFTGDPDQLPPIGCGKVLADIV
EAKTVANTMLDIVKRQEGSTGIPEYSKLINQGVMPDRLSTGAIHFHETSKTDIAKVCCEL
YQQCPENSRVMAPTKALVSEINKLTQQAVNPDSTNLEFEINGDKFFLPLRMNDAVLFTQN
HYDKGIQNGSLGTLTNAKPSGDSYGEVTLDTGEKVEITQSVLDCMELGYAITLHKAQGSQ
FPRIIIALQKSRIVDRAWLYTAITRAESEIHIVGSSDVMRQITEAPSHSHKRNSYLKELL
S
NT seq 2166 nt   +upstreamnt  +downstreamnt
atgaatagcgctttgcatgaagaccaaatgcgtgtaactagtatcccttatcgctcgacc
aagatagtgatattcagcggtgtaccattggcgaaagactcttacaaaaccaatagtggg
aagtattacatcacgatcaaagccgaccccgatagcatccctgtgcttccaacgctgggc
cagcactggtcagtcaaaggcgctcgccagatagaaaatatggagatgggtgattatgta
atgcagcagcacacgtatgaatcacccaagcatattgaatgcacgctgcccgaaactggc
gaacaactgatacgctttatcgccaaagaaaatgacttcaagggcattggtgaaagcaaa
gctagggcgctctggcagctcttgggtaaaaacttccatgccacactgcgaaatgatacc
ccagagtctagaaagcgtctgacatcgattctgagtgacgattcagtggaagcgctcttt
aaggggtacgccaaatataaaaatctggcacattccaattggatgagtgagcacaacacc
cccgccagtgtgcagcaacggctactcaaacatcacggtgaagcttccatagaggtcatt
aaagatagtccttatgctctaatgggctttggtctttcgttcagtgccattgaagatatt
atcaaggtaacggattttaagagcgatgttgcgaaggatgacccaagaaggctcagcgct
gctctggaaatggcgattcgcaaggagattgaaaaaggtcacacctataccactcatgcc
aatgtgcgccattacctcaataaactattgaaagacaaaacactggttactcaggcgttc
caatcaggtcatgataaagctcagtatattttaaatcccgacacaggagcctaccatcca
acggcgcaacttctgatggaaagtgtcgttgccaagcggctaaatacactgattaagcga
aatgacttgtttgatgaaaacgccaatgctgcgtattgctctgcggctgcggagcttccc
tacaacctaaccagtaaacaaatcgaagcagtcacaacgtgtctggataattcggtaagc
tgtattacgggcggtgcaggaacaggcaagacaacggtactcagaacggctctcagggca
tatcatcaacttgagtatgaaatacacgccgtggcactcagcggtcgtgcggcaatgaga
cttcatgagtccatcggttttgtcacctcaaccattgccaagttgcttcgtgaagaccct
atccaacccagtgtcgatgagcccaatcacctactggtgattgatgaggcaagcatgatt
gacttgccaaccatgtatcgtcttgtgaatcacattcacccctccgtacgattgatattc
actggcgaccccgaccaacttccacctatcggctgcggcaaggtgttggcagacatcgtt
gaagcaaaaacggtggctaatacgatgttagatatcgtcaagagacaggaaggttcaacg
ggtatccccgaatactcaaagctcatcaatcagggtgtgatgcctgatcgattaagtacg
ggagcaatacactttcacgaaaccagtaaaacagacattgccaaagtctgttgtgagctt
taccaacaatgccctgaaaacagtcgcgtcatggctccaaccaaggcactcgtatcagaa
atcaataaactcacccaacaagccgttaacccagatagcactaaccttgagttcgaaatc
aatggcgataagttctttttgccacttcgcatgaatgatgcggtgttgtttacgcagaat
cattacgacaaaggcattcagaatggctcacttggcacactaaccaacgccaaaccttct
ggggatagttacggtgaagtgacgctagatacaggcgaaaaggtcgagataacacaatcc
gttctcgactgcatggagttgggttacgcaatcaccctacacaaagctcaaggatcacag
tttcctcgcatcatcattgcattgcaaaaaagtagaattgttgatcgcgcttggctctat
acggcaattacaagagcagaaagcgaaattcatatcgttggaagtagtgatgtcatgagg
cagatcaccgaagcgcctagccactctcataagcggaatagctacctgaaagaactgttg
agttag

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