Vibrio coralliilyticus RE98: IX92_11590
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Entry
IX92_11590 CDS
T03444
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
vcy
Vibrio coralliilyticus RE98
Pathway
vcy03030
DNA replication
vcy03430
Mismatch repair
vcy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vcy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IX92_11590 (holA)
03430 Mismatch repair
IX92_11590 (holA)
03440 Homologous recombination
IX92_11590 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcy03032
]
IX92_11590 (holA)
03400 DNA repair and recombination proteins [BR:
vcy03400
]
IX92_11590 (holA)
Enzymes [BR:
vcy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IX92_11590 (holA)
DNA replication proteins [BR:
vcy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IX92_11590 (holA)
DNA repair and recombination proteins [BR:
vcy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IX92_11590 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_gamma3
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
AIW19648
UniProt:
A0AAN0SF26
LinkDB
All DBs
Position
1:2502196..2503209
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AA seq
337 aa
AA seq
DB search
MRIFADRLVEQLNKQLHPTYLIFGNEPLLLQESRQSIQKAAYTQGFEERHRFAVDNSFDW
NLVYDSCQALSLFSSRQLIELVLPESGVNAAIAKELLGISEVLHSDIILVVIGTKLTKAQ
ENAKWFKALSSRGCWVNCLTPDLSRLPQFVQSRCRTLKLTPDAEAIQMLAQWHEGNLFAL
TQSLEKLALLYPDGQLNLIRLEESLSRHNHFTAFHWSDALLAGKANRAQRVLRQLEAEGV
EAVILLRTIQKELTQLLSMQQQMQSQAIGQVFEHYRIWQSKRPLYSAALNRLSQTKITQL
IQLIAKAEVISKTQYEISSWPLLHQLSTEMCLPQVKL
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatcttcgcagatcggctggtggagcagctcaataagcagctccaccctacttac
ctgatttttggcaatgagccattactactacaagaatctcgtcagtccattcaaaaagcc
gcttacactcagggctttgaagaacgacaccgattcgcagtagacaatagctttgattgg
aacttagtgtatgacagttgccaagcattaagcctgttttcatcacgccaattgattgag
ttagtactcccagaatcaggggtaaacgcggcgattgcaaaagagctactaggcatttca
gaggtgttacacagcgacatcatattagtcgtgattggcactaagctcaccaaagcacaa
gaaaatgctaaatggtttaaagccttgtcttcccgtggctgctgggtaaattgcctcacc
ccagacctcagccgcctgccccaatttgtccagtcacgctgcagaacattgaaattgact
ccggatgcagaagcgattcagatgttagctcagtggcatgaaggcaacttgtttgcactg
acacaaagcttggaaaaactcgcgcttttgtaccctgacgggcaattaaacctcatcaga
ctcgaagagtcactgagccgacataatcattttacggcatttcactggtcagacgctctg
ctagcaggtaaagctaaccgtgctcaacgagtattaaggcaactagaagcggaaggcgtt
gaagcggtaattttgcttcgaaccattcaaaaagagttgactcagctactctcgatgcag
caacaaatgcaatcgcaagccataggacaagtgtttgaacactaccggatatggcaatca
aagcgaccgctgtactctgcggcgttaaaccgtctttcacagacaaagatcactcagcta
atccagttaattgctaaagccgaagttatctctaaaactcaatatgagatttcaagttgg
ccactattgcatcagttaagtactgagatgtgcttgccacaagtgaagctttaa
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