Vibrio coralliilyticus RE98: IX92_11650
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Entry
IX92_11650 CDS
T03444
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vcy
Vibrio coralliilyticus RE98
Pathway
vcy00260
Glycine, serine and threonine metabolism
vcy00460
Cyanoamino acid metabolism
vcy00630
Glyoxylate and dicarboxylate metabolism
vcy00670
One carbon pool by folate
vcy00680
Methane metabolism
vcy01100
Metabolic pathways
vcy01110
Biosynthesis of secondary metabolites
vcy01120
Microbial metabolism in diverse environments
vcy01200
Carbon metabolism
vcy01230
Biosynthesis of amino acids
vcy01240
Biosynthesis of cofactors
vcy04981
Folate transport and metabolism
Module
vcy_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vcy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
IX92_11650 (glyA)
09102 Energy metabolism
00680 Methane metabolism
IX92_11650 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
IX92_11650 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
IX92_11650 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
IX92_11650 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
IX92_11650 (glyA)
Enzymes [BR:
vcy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
IX92_11650 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
OKR_DC_1
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AIW19660
UniProt:
A0AAN0SCR8
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All DBs
Position
1:complement(2512746..2513996)
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AA seq
416 aa
AA seq
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MLKRDMNIADYDAELFAAIQEETLRQEEHIELIASENYTSPRVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDKAEALAIDRACQLFGCEYANVQPHSGSQANSAVYMALLNPGDTVLGMS
LAHGGHLTHGSPVNFSGKHYNVIPYGIDEAGQINYDEMEQLALEHKPKMIIGGFSAYSQI
VDWARMREIADKAGAYLFVDMAHVAGLIAAGEYPTPVPHAHVVTTTTHKTLAGPRGGLIL
SNAGEDMYKKLNSAVFPGGQGGPLMHVIAGKAIAFKEAMEPEFKAYQARVVKNAKAMVAQ
FQERGYKIVSNGTENHLFLVDLIDKDITGKDADAALGAANITVNKNSVPNDPRSPFVTSG
IRVGSPAITRRGFTEEDAKELANWMCDVLDNIGNEDVISATKAKVLEICKRLPVYA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgctaaagcgtgatatgaacatcgcagattacgatgcggaactgttcgcagcaatccaa
gaagaaactcttcgccaggaagaacacattgaactaatcgcttctgaaaactacacgagc
ccacgtgtaatggaagctcaaggttctcagctaacaaacaaatacgctgaaggctaccct
ggcaagcgctactatggcggttgtgaatacgttgataaagcggaagctttggcaattgat
cgtgcatgtcagctattcggctgtgagtacgctaacgttcaacctcactcgggctcacaa
gcaaacagcgctgtgtacatggcattgctaaatccaggtgatactgttctaggcatgagc
ctagcgcatggtggtcacttgactcatggctcaccagtaaacttctctggtaaacactac
aacgtgattccttacggtatcgacgaagcgggtcaaatcaactacgacgagatggagcaa
cttgctctagagcacaagcctaagatgattatcggcggcttctcggcttactctcaaatc
gttgactgggctcgcatgcgtgaaatcgcagacaaagcaggcgcgtacctgttcgtagac
atggcgcacgttgcgggtctaatcgcagcaggcgaatacccaacgccagtccctcacgct
cacgtagtgacgacgactacgcacaagacactagcaggcccacgtggtggtctaatcctg
tctaacgctggcgaagatatgtacaagaagttgaactcagcggtattccctggtggtcag
ggtggtcctctgatgcatgttattgcaggtaaagcgatagcgttcaaagaagcaatggag
ccagaattcaaagcataccaagcgcgcgtagtgaagaacgctaaagcgatggttgcccag
ttccaagagcgtggttacaagatcgtttctaacggtacagagaaccacctgttcctagtt
gacctcatcgacaaagacatcacaggtaaagatgctgatgcagcacttggtgcagcaaac
atcacggtaaacaagaactcagtaccaaacgatccacgtagcccgtttgtgacttctggt
atccgtgtaggctctccagcaatcactcgtcgtggtttcactgaagaagatgcaaaagag
ctagcgaactggatgtgtgacgttctagataacatcggaaatgaggatgttatctcagca
actaaagccaaggttctagagatctgtaagcgtctacctgtttacgcttaa
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