Vibrio coralliilyticus RE98: IX92_12250
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Entry
IX92_12250 CDS
T03444
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
vcy
Vibrio coralliilyticus RE98
Pathway
vcy00220
Arginine biosynthesis
vcy00240
Pyrimidine metabolism
vcy00250
Alanine, aspartate and glutamate metabolism
vcy01100
Metabolic pathways
vcy01110
Biosynthesis of secondary metabolites
vcy01240
Biosynthesis of cofactors
Module
vcy_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
vcy00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
IX92_12250 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
IX92_12250 (carB)
00220 Arginine biosynthesis
IX92_12250 (carB)
Enzymes [BR:
vcy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
IX92_12250 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_4
Epimerase
GSH-S_ATP
Motif
Other DBs
NCBI-ProteinID:
AIW19770
UniProt:
A0AAN0SF41
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All DBs
Position
1:complement(2638923..2642153)
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AA seq
1076 aa
AA seq
DB search
MPKRTDLKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDM
ADATYIEPIQWEVVRKIIEKERPDAVLPTMGGQTALNCALDLEKHGVLEEFGVEMIGATA
DAIDKAEDRSRFDKAMKSIGLECPRADTAKTMEEAYKVLDMVGFPCIIRPSFTMGGTGGG
IAYNKEEFEEICRRGLDLSPTNELLIDESLIGWKEYEMEVVRDKADNCIIVCSIENFDPM
GIHTGDSITVAPAQTLTDKEYQLMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELQNDITGGATPASFEPTIDYVVTKIP
RFNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGANGFDEMVDLDAPDA
LTTIRHELKEAGAERIWYIADAFRAGMSVDGVFNLTAIDRWFLVQIEELVNLENQVKAGG
FAGLTEDVLRKMKRKGFSDARLSSILGVSENEIRRLRDQYDIHPVYKRVDTCAAEFSSDT
AYMYSSYDEECEAQPTDKDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC
NPETVSTDYDTSDRLYFEPVTLEDVLSIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPI
IGTSPDAIDRAEDRERFQAAVDRLGLLQPENATVTTIEQAVEKSKEIGFPLVVRPSYVLG
GRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDRFLDDATEVDIDAICDGERVVIGGIMEH
IEQAGVHSGDSACSLPAYTLSQEIQDKMREQVEKLAFELGVRGLMNTQFAVKDNEVYLIE
VNPRAARTVPFVSKATGAPLAKIAARVMAGQSLESQGFTKEIIPPYYSVKEVVLPFNKFP
GVDPLLGPEMRSTGEVMGVGATFAEAYAKAELGCGAVYPEGGRALLSVREGDKQRVVDLA
SKLTKLGYQLDATHGTAVILGEAGINPRLVNKVHEGRPHILDRIKNNEYTYIVNTAAGRQ
AIEDSKVLRRGALAEKVNYTTTLNAAFAVCMAHTADAKTSVTSVQELHTKVAQNEA
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtactgacttaaaaagtattctaattctaggtgcaggcccgattgttatt
ggtcaggcatgtgagtttgactactctggtgctcaagcatgtaaagcactgcgcgaagag
ggttatcgagttatccttgtaaactctaaccctgcaaccatcatgactgacccagacatg
gcggatgcgacttacatcgaaccaatccagtgggaagtggttcgcaagatcattgagaaa
gaacgtccagatgcagtactgcctactatgggtggccagacggctcttaactgtgctcta
gaccttgagaagcacggcgtacttgaagagttcggcgtagagatgatcggtgcaactgct
gatgccatcgacaaagcagaagaccgttctcgttttgataaagcgatgaagtcaatcggc
ctagagtgtccgcgtgcggatacggctaagacgatggaagaagcttacaaagttctcgat
atggttggcttcccctgtatcattcgtccttcattcactatgggtggcactggtggtggc
atcgcttacaacaaagaagagttcgaagagatctgtcgtcgtggtttggacctttctccg
accaacgagcttctaatcgatgaatcactaatcggttggaaagagtatgagatggaagtg
gttcgtgacaaagcggacaactgtatcatcgtatgttctatcgaaaacttcgacccaatg
ggtatccacactggtgactcaattacagtggcaccagcccaaacgctgactgacaaagag
taccagttgatgcgtaatgcatcgctagcagtactgcgcgaaatcggtgttgagaccggt
ggttcaaacgtacagtttggtattaatccgaaagatggccgcatggttatcatcgagatg
aacccacgtgtatctcgatcttctgctcttgcttctaaagcaacaggtttcccaatcgct
aagattgcagcgaaattggccgttgggttcactcttgatgagctacagaacgacatcacg
ggtggtgcgactcctgcgtcattcgaaccaacaatcgactacgtagtaactaagattcct
cgctttaacttcgagaaatttgcaggtgctaatgaccgcctgacaactcagatgaagtcc
gttggtgaggttatggctatcggccgtaaccaacaagagtctctacaaaaagcgcttcgt
ggccttgaagttggtgccaacggttttgacgaaatggttgacctggatgcgcctgacgca
ctaacaacaattcgtcatgaactaaaagaagctggcgcagagcgtatctggtacatcgca
gacgcattccgtgctggtatgtcagtagatggcgtattcaatctaacggcaattgaccgt
tggttcctagttcagattgaagaactggttaacctggaaaaccaagttaaggcaggcggc
tttgctggcttgactgaagatgtgctacgtaagatgaagcgtaaaggtttctctgatgct
cgtctatcttcaattcttggtgtatctgagaacgaaattcgtcgcctgcgtgaccagtac
gatatccacccagtatacaaacgcgttgatacttgtgcggctgagttctcttctgacacc
gcttacatgtactcatcttacgatgaagagtgtgaagcgcagccgacagacaaagacaag
atcatggttcttggtggtggtccaaaccgtatcggtcaaggcatcgaatttgactactgt
tgtgtgcacgcgtcactagcactgcgtgaagatggttacgaaactatcatggttaactgt
aacccagagacagtttctactgactacgatacttcagaccgtctgtacttcgaaccagtc
acacttgaagatgttctttcaatcgtccgtattgagaagccaaaaggcgttatcgttcag
tacggtggtcagactccacttaagctggctcgtgctctagaagcagcaggtgtaccaatc
atcggtactagccctgatgccatagaccgcgctgaagaccgtgagcgtttccaagctgcc
gttgaccgtctgggtcttctacagccagaaaacgcaacagtaacgacaattgagcaagcg
gtagagaaatcgaaagaaattggcttcccactggttgtacgtccttcatacgtactaggt
ggtcgcgcaatggaaatcgtctacgacgagcaagacctacgccgctacttcaacgaagcg
gtgagcgtgtcgaacgagtcgccagttcttctagaccgtttcctagacgacgcaactgaa
gtagatatcgatgctatctgtgacggcgagcgcgtagttatcggcggtatcatggagcac
atcgagcaagcgggggttcactctggtgactcggcatgttcactacctgcttacacgcta
agtcaggaaatccaggataagatgcgtgagcaagtagagaagctagctttcgaacttggt
gtacgcggtctgatgaacactcagtttgctgttaaagataacgaagtttacctaatcgaa
gtaaaccctcgtgctgctcgtacagtaccattcgtatctaaagcaacgggtgctccacta
gcgaaaatcgctgcacgtgttatggcgggtcaatctctagagtctcagggctttactaaa
gaaattatcccaccttactactcagtgaaagaagtggtacttccgttcaacaagttccct
ggtgttgacccactgttaggtccagaaatgcgctctactggtgaggtaatgggtgtaggt
gcaacgttcgcagaagcttacgcgaaagcggaacttggttgtggcgcagtttacccagaa
ggtggtcgtgcactgctgtcagttcgtgaaggcgataagcagcgtgtggtagacctggcg
tctaagctaactaagcttggttaccaactggatgcaacgcacggaacagcagttatccta
ggcgaagcaggtatcaacccacgtctggtgaacaaggtacacgaaggtcgtccacatatt
cttgaccgtatcaagaacaacgagtacacctacatcgtcaacaccgcggcaggtcgtcaa
gctattgaggattcaaaagtactacgtcgtggtgcattggctgagaaagttaactacaca
acgacactgaatgcagcgtttgcagtgtgtatggcacatacggctgacgctaaaacgtca
gtgacttcagttcaagagctgcacactaaagtggcacagaacgaagcgtaa
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