Vibrio coralliilyticus RE98: IX92_12310
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Entry
IX92_12310 CDS
T03444
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
vcy
Vibrio coralliilyticus RE98
Pathway
vcy00470
D-Amino acid metabolism
vcy00550
Peptidoglycan biosynthesis
vcy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vcy00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
IX92_12310 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
IX92_12310 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vcy01011
]
IX92_12310 (murD)
Enzymes [BR:
vcy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
IX92_12310 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
vcy01011
]
Precursor biosynthesis
Amino acid ligase
IX92_12310 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
Pyr_redox_2
DAO
NAD_binding_8
NAD_binding_9
Motif
Other DBs
NCBI-ProteinID:
AIW19782
UniProt:
A0AAN0SCM1
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All DBs
Position
1:complement(2656628..2657947)
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AA seq
439 aa
AA seq
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MDRWQNIESVVVVGLGITGLSVVKYLAKLPYNFTIRVIDTRENPPGSEALPQSVELHAGG
WNSDWLLNADLVVANPGIALATAEIQQALNAGVQVVGDIELFAWQVDKPVVAITGSNGKS
TVTDLTGVVANAAGVKTAIGGNIGVPALDLLDQDADLYVLELSSFQLETTSSLALKAAAF
LNLSEDHMDRYDDMEGYRQAKLRIFEQAQACIVNADDPATYPDNTDASLVEFSLEKSCEF
HVKVVEGREYLCHQDAKILASDELSLVGRHNVANALVVLALLEQAGVDISLGIDALKSYN
GLTHRCQVVADNNGVKWVNDSKATNVASTLAALSGLSLSGKLYLLVGGDGKGADFSELHP
ALDQLDVQLCCFGADGDKFLPLHRDAKRFETMEDIVKWASPRMEAGDMIMLSPACASFDQ
FKNFMVRGDAFTALAKHYA
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggatcgttggcagaacatagagagtgttgtcgttgtagggctcggtattaccgggctc
tcagtcgttaaatacttagcaaaattgccttacaacttcaccattcgtgtcatcgatacc
cgtgaaaatccaccgggaagcgaagctctacctcaaagtgttgagttacatgctggcggc
tggaacagcgactggttgctaaatgcggatttagtggtggcgaacccagggatcgcgctt
gccactgctgaaattcaacaggcgctcaacgcaggtgtacaagtggttggagacatcgag
ctgtttgcttggcaggtggataagccagttgtagccattactggttcgaatgggaaaagc
actgttacggacctgacgggtgtcgtcgccaatgctgctggcgtgaagacagcgattggc
ggcaatatcggagtgcctgcgttggatctattagatcaagatgccgacttatatgtgctc
gaactctccagcttccaattagaaaccacttctagccttgctctaaaagccgcggcattc
ctgaatttatcggaagaccatatggatcgttatgacgatatggaaggataccgtcaggca
aagcttcgcatttttgagcaagcacaggcgtgcattgtcaatgcagatgatcctgcgacc
tacccagataacacagatgcgtctctagtcgaatttagccttgaaaaaagttgcgagttc
catgtcaaagtagtggaaggaagagagtatttgtgtcaccaagatgcaaaaatactggca
tctgacgagctaagcctagtaggaagacacaatgttgctaacgcgctggtcgtacttgcc
ctactcgaacaagcaggtgttgatatttctcttggaatagatgcacttaagtcttacaac
ggtctgacacatcgatgtcaggtcgttgcggataataacggcgttaaatgggtcaatgat
tcgaaagctaccaatgtcgccagcactttagctgcgctgtcaggcttatcactctccggt
aaactctacttgttggttggcggagatggtaaaggcgctgatttttcagagttacatccc
gctttggaccaattggatgtccagctatgctgctttggcgctgatggcgacaagtttctt
cctctgcatcgcgatgcaaaacgtttcgagactatggaagacatagtgaaatgggccagc
ccaagaatggaagccggtgacatgattatgttatctccagcttgcgccagctttgaccaa
tttaagaactttatggtgcgcggcgatgctttcactgcgttagccaaacattatgcgtag
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