Vibrio coralliilyticus RE98: IX92_12795
Help
Entry
IX92_12795 CDS
T03444
Name
(GenBank) peptidase
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
vcy
Vibrio coralliilyticus RE98
Pathway
vcy00550
Peptidoglycan biosynthesis
vcy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vcy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
IX92_12795
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
vcy01003
]
IX92_12795
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vcy01011
]
IX92_12795
Enzymes [BR:
vcy01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
IX92_12795
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
IX92_12795
Glycosyltransferases [BR:
vcy01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
IX92_12795
Peptidoglycan biosynthesis and degradation proteins [BR:
vcy01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
IX92_12795
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
AIW19872
UniProt:
A0AAN0SCR3
LinkDB
All DBs
Position
1:complement(2783111..2785471)
Genome browser
AA seq
786 aa
AA seq
DB search
MTKKKTPASSKTKTTKKPARKRATARRKPTQKGQRSWLKIVWGVTWKLGLAGFALLLFVG
IYLDSVVKQRFEGQLFDLPTVVYARILNLSPGDSISIQEVRNELDVLNYRKVRQPRYPGE
YSSSSTKIELIRRPFEFTDGPEPDRHVMLHFDRSGLLRIQSLESSGDLGYLRIEPKMLGM
LEKNHDEQRLFLRRDQFPEVMVDALLATEDRDFYQHDGVSPFAIARALVANLKAGRTVQG
GSTLTQQLAKNIFLSSDRTLWRKIREAYIALIIDYRYSKDRILEGYLNEVYLGQSRGEAI
HGFGLASRLYFGQPIQELRIDQLALLVGMVKGPSYYNPVRFPERAKERRDLVLRLMMQQG
ILSANQYDMAASRPLDIQDNPRIASRQPAYFQQLKIELKEKVGDAFQSDIGLRVFTSLDP
VSQQELEQAIAKKIPQLSKVAGKSLEGAAIAVDRHTGEIRAMVGGKRTGYDGFNRALNAS
RQIGSLAKPAVYLTALEQPDKYNLATTLHDKPISLKGSKGSVWSPRNYDRKFRGDVPLYI
ALAKSLNVPTVQLGMQLGIPNVVNTLEKLGVDRNEIRPVPSMFLGSFTLTPFQVAQMYQT
LTNSGKRAPLSALRSVVDLEGNALYQSLPRMSQTIDQQAAWLTTYAMKRGVLEGTGRYLN
SQFGWAALAGKTGTSNDTRDSWFVGVDGREVTTIWLGRDDNKPTKLTGSSGALRVYAEYL
NHRIPEKLTLPWPKGISTLGFSHTEQGSLQLDCDNQFKLPVWDTNNVLKQQCDSKPTQWI
KKIFSW
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagaaaaaaacaccggcgagcagcaaaactaaaacaaccaagaaacctgctcgc
aaacgggcgacagcgagacgcaagccaacccaaaaaggccaacgtagctggttgaaaatt
gtatggggagtgacctggaagcttggtcttgctgggtttgccttactgctgtttgtcggt
atttacctagacagtgtggttaaacagcgtttcgaaggccagctgtttgatctgccgacc
gtggtttacgctcgcattcttaacctttctccgggtgattcgatttcgattcaggaagtt
cgcaacgaactcgatgtgctcaactaccgtaaagtacgccagcctcgttatcctggtgag
tattcgtcgtcgtcaaccaaaattgaactgattcgccgtccgtttgagtttactgatggg
ccggagcctgatcgtcatgtgatgctgcattttgaccgttctggcttacttcgtattcag
tcgctcgaatcctccggtgatctgggctatttgcggatcgagccgaagatgttgggcatg
ctggagaagaatcatgatgagcagcgtctattcttgaggcgagatcagtttcctgaagtc
atggttgatgcattactggctaccgaagaccgagacttttatcagcatgatggagtctca
ccgtttgcgattgcccgagcattagttgccaatctcaaagcaggtcgcacggtacagggg
ggcagtaccctgactcagcagctcgcgaagaacattttcctttcgagtgatcgaacgttg
tggcgtaagatccgtgaagcctatatcgcattgatcattgattaccgctacagcaaagac
cgcattctggaaggttacctgaatgaagtatatttagggcaaagccgtggggaagccatt
cacggctttgggctggcttcccgcttatactttgggcagccgattcaagaactacgcatt
gaccagctcgcattactggtgggtatggtaaaggggccatcctactacaacccggtacgc
tttcctgagcgagccaaagagcgtcgagatttagtgcttcgtctgatgatgcagcagggg
atcttgagtgctaaccagtacgacatggcagctagtcgcccgctggacattcaggataac
cctcgtattgctagccgtcagccggcttactttcagcagttgaagattgagctgaaagag
aaagttggtgatgcgtttcagtcggacattggtctcagggtgtttacatctctcgatccg
gtttctcaacaagagctggaacaggccattgccaagaaaatacctcagcttagcaaagtc
gcaggcaagtcactcgaaggggcagcgatcgccgttgaccgccataccggtgaaattcgc
gctatggtcgggggtaaacgaacagggtacgacggattcaatcgtgcgcttaacgccagt
cgtcaaattggatcgttagccaaaccagcagtctatctcaccgctttggagcagcctgac
aaatacaatctggctacgactttgcacgataaaccgatcagccttaagggttcaaaaggc
agtgtttggtcgccgcgcaactatgaccgtaagtttcgaggggacgtgcctttgtacatt
gcattggcaaaatctctcaacgtaccgacagtgcagctaggtatgcagctcggcattcca
aatgttgtcaatactttggagaagttgggtgttgaccgaaatgaaattcgtcctgtgccg
tcaatgttccttggttccttcacattaacgccattccaggtcgcgcagatgtatcagacg
ttgaccaattcgggtaagcgggcgcccttgtctgcgctacgttcggtggtcgatttagaa
ggtaatgcgctgtatcagtcactgccgcgaatgtctcaaactatcgaccagcaagcagct
tggctgacgacctacgctatgaaacgcggcgtcttagaaggcactggccgttatctcaac
agccagtttggctgggcggcgttagctggaaaaacgggaaccagtaacgatacgcgtgac
agctggtttgttggtgtcgatggacgcgaagtaacaactatctggcttggtcgagatgat
aataagccaacaaaacttacgggttccagcggtgcgttacgagtctatgcagaatatctc
aaccaccgcataccggaaaaactgacgttaccttggccaaagggaatcagtactcttggt
ttttctcatactgaacaaggcagcctgcaactggactgcgataatcagtttaagctgcca
gtttgggacacaaacaatgtgctcaagcagcagtgtgacagcaaacccactcaatggatt
aagaaaatatttagttggtaa
DBGET
integrated database retrieval system
