Vibrio coralliilyticus RE98: IX92_12820
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Entry
IX92_12820 CDS
T03444
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
vcy
Vibrio coralliilyticus RE98
Pathway
vcy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vcy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IX92_12820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcy03019
]
IX92_12820
Enzymes [BR:
vcy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
IX92_12820
Messenger RNA biogenesis [BR:
vcy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
IX92_12820
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AIW19877
UniProt:
A0AAN0SD08
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All DBs
Position
1:2790356..2791726
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AA seq
456 aa
AA seq
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MHMTKNDYTPSEKDSYPELSLNIITRQEHNISRKQISDNALKVLYRLHGAGFDAFLVGGG
VRDLLLAQNPKDFDIATNATPEQIRQLFKNCRLIGRRFRLAHIMFGRDIIEVATFRGHHQ
ETSKNISQQSKEGMLLRDNVYGTIDEDAERRDFTINAMYYNIGDYAIHDYAGGNEDLEDR
LVRLIGDPETRYREDPVRMLRAIRFAVKLDFDIEEDTAAPIEEMSPLLRDIPSARLYEES
LKMLQSGYGLETYHLMREYNLFQQLFPVISEDFTEEYSTKTEQMLDLVLDSTDQRIEEGK
RINPAFMFAAMLWYPLQARAELLMEKRKLSAYDAIMEASNYILDEQVRTIAIPRRHTATI
REIWQLQLRMPRRNGKRAFRLMELNKFRAGFDFLEMRGEIEGGETEQLAKWWETFQNAGR
NMRQSMVADLDAESPEQGKKRRRKPFRKKKTKASTS
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgcacatgactaaaaacgactatacaccaagcgaaaaagacagttatccagagttatct
ctgaacattattactcgccaagagcataatatctctcgcaagcaaatcagcgacaatgca
ttgaaggtgctataccgacttcatggtgcaggctttgatgccttccttgtcggtggaggc
gtgcgcgatctgctacttgcacagaacccaaaagatttcgatatcgcaaccaatgccaca
cctgagcaaattcgccagttgttcaagaattgccgcctgattggccgccgttttcgtctg
gcgcatatcatgtttggccgcgatattattgaagtagcgactttccgtggtcaccatcaa
gaaaccagcaaaaatatttctcagcaatcgaaagaaggcatgctgttgcgcgataacgtc
tatggcaccattgacgaagatgcggagcgtcgtgatttcaccatcaatgcgatgtactac
aacatcggtgattatgcgattcatgactatgctggcggtaatgaagatttagaagaccga
ttagtacgcctgattggcgatcctgaaacgcgttatcgcgaagatccagtgcgcatgctg
cgtgccattcgctttgccgtaaagctagacttcgatatcgaggaagatacagcagcacct
attgaagaaatgtcaccactgcttcgtgatattccatcggcacgcctgtacgaagaatca
ctcaagatgctgcaatcaggttatggtttagaaacctaccacctgatgcgtgagtacaac
ctattccagcaactcttccctgtcatctctgaagacttcacagaggaatactccacaaaa
accgagcagatgctggatctcgttttagattctaccgatcaacgcatcgaagaaggcaaa
cgaattaatcctgctttcatgttcgcggctatgttgtggtacccactgcaagcccgtgcc
gaattactgatggagaagcgtaagctctctgcctatgatgccatcatggaagccagtaat
tacatccttgatgagcaggttcgtactattgccatacctcgccgccataccgcaacgatt
cgcgaaatctggcaattgcaacttcgcatgccacgtcgtaatggcaaacgcgctttccgc
ttaatggaacttaacaagttccgtgctggctttgattttcttgaaatgcgcggtgaaatt
gaaggtggtgaaactgaacaattagccaaatggtgggaaaccttccaaaacgcagggcgc
aacatgcgccagtccatggtggcagatttggacgcagagtctcctgagcagggcaaaaag
cgtcgtcgtaaaccatttcgcaagaaaaaaaccaaggcttcaacatcatga
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