KEGG   Vibrio coralliilyticus RE98: IX92_12980
Entry
IX92_12980        CDS       T03444                                 
Name
(GenBank) signal recognition particle
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
vcy  Vibrio coralliilyticus RE98
Pathway
vcy02024  Quorum sensing
vcy03060  Protein export
vcy03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vcy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    IX92_12980
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    IX92_12980
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    IX92_12980
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vcy02044]
    IX92_12980
Enzymes [BR:vcy01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     IX92_12980
Secretion system [BR:vcy02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   IX92_12980
  Eukaryotic Sec-SRP protein
   IX92_12980
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA Zeta_toxin AAA_22 cobW KTI12 T2SSE AAA_30 AAA_31 AAA_33 Mg_chelatase AAA_18 AAA_19 APS_kinase ABC_tran AAA_14 KAP_NTPase ATP_bind_1 Rad17 AAA_24 AAA_16 Helicase_RecD Thymidylate_kin
Other DBs
NCBI-ProteinID: AIW19908
UniProt: A0A0A0SSJ6
LinkDB
Position
1:complement(2822453..2823844)
AA seq 463 aa
MFENLTDRLSKTLKNISGKGRLTEDNIKDTLREVRMALLEADVALPVVRDFVKRVKEGAV
GVEVSKSLTPGQEFIKIVQSELEAVMGESNEALNLAAQPPAVILMAGLQGAGKTTSVGKL
SKLLKERDKKKVLVVSADVYRPAAIKQLETLASEIGVDFFPSSPDQKPIDIANAAIDHAK
KKFYDVLLVDTAGRLAIDEQMMGEIQELHSAIDPVETLFVVDAMTGQDAANTAKAFGDAL
PLTGVILTKVDGDARGGAALSVRHITGKPIKFLGVGEKTDALEPFHPDRVASRILGMGDV
LSLIEDLQRNVDTEKAEKLAKKFKEKKGFDLEDFREQLGQMQNMGGMMGMMDKLPGMSNL
PDNVKDKVDDKMFKQMEAIINSMTMKERQRPELIKGSRKKRIAAGSGTQVQDVNRLLKQF
TQMQKMMKKMQKGGMKGMMRNMQGMMGGMGGMGGGGGFNPFGR
NT seq 1392 nt   +upstreamnt  +downstreamnt
atgtttgagaatttaacggatcgattatccaaaacgctgaagaatatcagcggtaaaggt
cgtttgaccgaagacaatataaaagacactttgcgtgaagtgcgcatggcgctgcttgaa
gccgacgtcgctcttccggttgtacgtgattttgtcaaacgcgtaaaagaaggcgccgtg
ggcgtagaggtttctaagtctctaacccctggtcaagagttcattaagattgttcaatct
gaacttgaagctgtgatgggtgagtccaatgaggctctaaaccttgctgcacagccgccg
gctgtgatcctcatggcaggtttgcaaggtgcaggtaaaaccacctcggttggtaagctt
tctaagttgttaaaagagagagacaagaagaaagtcttggttgtctctgcggacgtctat
cgccctgcggcgatcaaacagctagaaacgctggcttcagagattggtgtcgatttcttc
ccatcatcgcctgatcaaaagccgattgatattgccaacgctgcgatagaccatgcgaag
aagaagttctatgacgttcttcttgtcgatactgcaggtcgcctagcgatcgatgagcag
atgatgggagagatccaagagcttcactctgcaattgatcctgttgaaactctgtttgtt
gtcgatgcaatgactggtcaggatgccgcaaacacagcgaaagcgtttggcgatgcgtta
ccactgacgggtgttatcctaaccaaggtcgatggtgatgcgcgtggtggtgcggcactt
tcggttcgtcacatcacaggtaaaccaattaaattcttgggtgtcggtgagaaaactgat
gcactagaaccattccaccctgatcgtgttgcttcacgtattcttggtatgggtgacgta
ctgtcgcttatcgaagatctacaacgtaatgttgatactgagaaagcagagaagctggct
aagaagtttaaagagaagaaaggcttcgaccttgaagacttccgtgaacaacttggtcag
atgcagaacatgggcggcatgatgggcatgatggataagctgccaggcatgagcaatttg
ccagacaacgtcaaagataaagtcgatgataagatgtttaagcaaatggaagccatcatc
aattccatgaccatgaaagaacgtcaacgtcctgagttgattaaaggctcgcgtaaaaaa
cgtattgctgcgggttctggtactcaggttcaggatgttaaccgcctgctcaagcaattc
actcagatgcagaagatgatgaagaaaatgcagaagggtggaatgaaaggcatgatgcgc
aacatgcaaggcatgatgggtggcatgggcggtatgggtggaggcggaggcttcaaccca
tttgggcgttaa

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