Vibrio coralliilyticus RE98: IX92_13015
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Entry
IX92_13015 CDS
T03444
Name
(GenBank) pseudouridine synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
vcy
Vibrio coralliilyticus RE98
Brite
KEGG Orthology (KO) [BR:
vcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcy03016
]
IX92_13015
Enzymes [BR:
vcy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
IX92_13015
Transfer RNA biogenesis [BR:
vcy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IX92_13015
Prokaryotic type
IX92_13015
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AIW19915
UniProt:
A0AAN0SD47
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All DBs
Position
1:complement(2829657..2830703)
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AA seq
348 aa
AA seq
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MTDILSSLAYLNGKPQATGKLKAQPQHFQVNEELGFAFTGEGEHLMVRIRKTGENTSFVA
NELAKACGVKSKDVSWAGLKDRHAVTEQWLSVHLPKGDTPDFRAFLSQHPSIEIVEISRH
NKKLRPGDLIGNDFIITLTEVSDVEDVLVRLESIRQHGVPNYFGSQRFGNNGNNLNEARR
WGRENVRTRNQNKRSLYLSAARSWIFNNIVSQRIEQDVFNQVIEGDCIQASEGVVIAESE
ALAELNETVKQGDAQITAAMAGDNALPTTEKALALEQPHLDAEPDLMALIRGNRMRHDRR
PVALKPQELSWSVEQDAITLRFSLDAGCFATAIIRELIQEQEVERSYE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgactgacattttatcttcacttgcctatttgaatggaaaacctcaagccacggggaag
ttgaaagcccagccgcagcattttcaggttaacgaggagcttggctttgcctttacgggc
gaaggagagcatctgatggtgcgtatccgtaagacgggagagaacaccagcttcgttgcg
aatgagctggcgaaagcctgcggcgtgaaatcgaaagatgtcagctgggctggtttaaaa
gatcgtcatgctgtgactgagcagtggctaagtgttcacctgcctaaaggggatactcct
gatttcagagcgtttctcagccaacatccaagtattgagattgttgaaatcagccgccac
aacaaaaaattacgcccaggtgatttaatcggaaacgattttatcatcacgttgacagaa
gtaagtgatgtcgaagatgtacttgtgcgactggaatccatccgccaacacggtgttcca
aattattttggtagtcagcgtttcgggaacaacggtaacaatctcaatgaagcaagacgt
tggggccgtgagaatgtgcgcactcgaaaccaaaataaaagaagcttgtatctttcggca
gcacgctcgtggatcttcaacaacatagtgtcacaacgcattgaacaagatgtgtttaat
caggttattgaaggtgattgtattcaggcttctgaaggcgttgtcattgctgaatcagaa
gcactggcagaacttaacgagaccgttaagcaaggcgatgcccagataacggcagcgatg
gcgggtgacaatgctttgcctactacagagaaggcgctggctttggaacagccccatctg
gatgcggagcctgacttgatggctctgattcgcggaaatcgtatgcgccatgaccgccga
cctgtagcgctaaaacctcaggagctctcttggagtgttgagcaggacgcgatcacactg
cgattctctttggatgccggctgcttcgccacagcaatcattcgtgagttgattcaggaa
caggaagtggagcgcagctacgaatga
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