Vibrio coralliilyticus RE98: IX92_17980
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Entry
IX92_17980 CDS
T03444
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vcy
Vibrio coralliilyticus RE98
Pathway
vcy00260
Glycine, serine and threonine metabolism
vcy00460
Cyanoamino acid metabolism
vcy00630
Glyoxylate and dicarboxylate metabolism
vcy00670
One carbon pool by folate
vcy00680
Methane metabolism
vcy01100
Metabolic pathways
vcy01110
Biosynthesis of secondary metabolites
vcy01120
Microbial metabolism in diverse environments
vcy01200
Carbon metabolism
vcy01230
Biosynthesis of amino acids
vcy01240
Biosynthesis of cofactors
vcy04981
Folate transport and metabolism
Module
vcy_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vcy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
IX92_17980 (glyA)
09102 Energy metabolism
00680 Methane metabolism
IX92_17980 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
IX92_17980 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
IX92_17980 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
IX92_17980 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
IX92_17980 (glyA)
Enzymes [BR:
vcy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
IX92_17980 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AIW20928
UniProt:
A0A097AYM9
LinkDB
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Position
2:complement(420563..421858)
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AA seq
431 aa
AA seq
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MNNTYQNHSLENFFSTNLAATDDAVFAGIQAENTRQNEQIELIASENIVSKAVMQAQGTC
LTNKYAEGYPGRRYYGGCEHVDTVEAIAIERAKQLFKCDFANVQPHSGAQANGAVKLALL
QPGDTILGMSLDAGGHLTHGARPALSGKWFNAVQYGVDRESLEINYEDVRALALEHKPKM
IIAGGSAIPRTIDFAKFREIADEVDAILMVDMAHIAGLIATGAHPSPLPHAHVVTTTTHK
TLRGPRGGMILTNHEDIIKKINSAVFPGLQGGPLMHVIAAKAVAFGEALGPEFNTYIDSV
INNAKVLAEVLQTRGCDIVTGGTDTHLMLVDLRPKGLKGNKAEEALERAGITCNKNGIPF
DSEKPMITSGIRLGTPAGTSRGFGAEEFKLIGNWIGDVLDGLVNNPEGDAEVEQRVRKEV
KALCNRYPLYQ
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacacttaccaaaatcacagcctagagaactttttctcgactaatcttgctgct
acagacgacgcggttttcgcaggtatccaagcggaaaacactcgtcagaacgaacaaatc
gagctcattgcttcagaaaacattgtttcaaaagcagtgatgcaagctcaaggcacttgc
ctaaccaacaaatacgcagaaggctaccctggtcgtcgttactacggcggttgtgaacat
gttgataccgtagaagcgattgcgattgagcgtgctaaacagctgttcaaatgcgatttc
gctaacgttcagcctcactctggagcacaggcaaacggcgcagttaaacttgctctactt
caacctggcgatactatcctaggcatgtctctggatgctggcggccacctaactcacggt
gcgcgccctgctctttctggtaaatggttcaacgctgttcagtacggtgtggatcgtgaa
tcactagaaatcaactacgaagacgttcgtgctctggcacttgagcacaaaccaaaaatg
atcatcgccggtggtagtgctattcctcgtactatcgacttcgcaaaattccgtgaaatc
gctgatgaagttgatgcgattctaatggtcgatatggcgcacatcgcaggtctgattgcg
accggtgctcatcctagcccactgccacacgctcacgttgttacaacaacaacgcataaa
acattgcgtggcccacgcggcggtatgattctgactaaccacgaagacatcatcaagaaa
atcaactcagcggtattcccaggccttcaaggtggcccactgatgcacgtgatcgcagct
aaagccgtcgctttcggtgaagctttaggccctgaattcaatacttatattgattcagtg
atcaataacgcaaaagttctggcggaagtattgcaaactcgcggttgtgacattgtgact
ggcggcactgacacgcacctgatgctggttgaccttcgtcctaagggcttgaaaggtaac
aaagcagaagaagcgttggagcgtgcagggatcacatgtaacaaaaatggcatcccattc
gattcagagaagcctatgattacatcgggcatccgtttagggacgcctgcggggacaagc
cgcggctttggcgctgaagaattcaaactcatcggtaactggattggcgatgtactggac
ggattggtgaacaaccctgaaggtgacgcagaagtagaacaacgcgttcgcaaagaagtg
aaagcgctgtgtaatcgctacccactttaccaataa
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