Vibrio coralliilyticus RE98: IX92_19945
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Entry
IX92_19945 CDS
T03444
Name
(GenBank) diguanylate cyclase
KO
K20962
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vcy
Vibrio coralliilyticus RE98
Pathway
vcy05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
IX92_19945
Enzymes [BR:
vcy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
IX92_19945
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAF
GAF_2
Hormone_recep
PI-PLC-Y
Motif
Other DBs
NCBI-ProteinID:
AIW21296
UniProt:
A0AAN0SH93
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All DBs
Position
2:complement(872957..874870)
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AA seq
637 aa
AA seq
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MSKINTSNLVIPDEMTSGWQNIVDLLAEIVSVPAALVMRIYPKHIEVYSSNNNGQHPYRV
GDSETLGQGLYCETVVNKQSQLIVPNAEIDPLWQDNPDIKFGMLAYCGVPINWPNGDTFG
TICVLDNKENHFSETYQQLIESFRDSIESQLKTLYQNEKLKHLNLELKSRVHTRTQDLVD
LNYSLNQEIDKRRAAEQKIRYQQRHDLGTGFLNRSALEHEAEHFIKDVGVSPSLQAAAIH
IGFTNGRRIQSKYGYSSWETVLVQYSKRLGDLSQYQLLTARPTSTDLVLLLESSQLERDL
NSISHQLVEVSQSEFDIDGDKLHLNAYIGISTTNDTLCPKNLLKYASEAMQSCKDSGHKF
SYYSQAIADIQKHINQMESYLLQAVRNDDLLLYFQPKVSPTTHKWTGAEALLRWRHPILG
DISNETLIHMAEQNGLIFEVGSFVLRAAIQKAAEWAEYVDDFKIAVNISAIQLKNPHFIE
QIEDLLNAYQLPAKFLELEVTESGLIADEVTARNTLIALNNLGVTLSLDDFGTGYSSFNY
LKKFPFDAIKVDKSFVQQLDESEEDKEIVRSIIHVAKKLNLIVTVEGIESETHEDFIISE
GCEYGQGYFYGKPMPCDEFETGLLRQNYPGNTNITYQ
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaataaatacttcgaatttggtcattccagacgaaatgaccagtggttggcaa
aatattgtcgacctgcttgctgagattgtgtcggtgcctgctgcattagttatgcgtatt
taccctaaacatatcgaagtgtactcatcaaacaacaacgggcaacacccttatcgcgtc
ggtgactcagaaaccttggggcaaggcttgtattgtgaaaccgtggttaataaacagagc
caactcattgttccgaacgccgaaatcgaccctctatggcaagataatccagatattaaa
tttggtatgctggcttattgtggagtgccgatcaactggccgaatggagatacgttcggc
acaatctgtgtacttgataacaaggaaaatcatttttccgaaacttatcaacagctgatt
gagagctttcgtgactccatagaatcacagctaaaaactctatatcaaaatgaaaagctc
aaacacctcaatttagagctcaaatccagagtccacactcgcactcaggatcttgtcgat
ctcaactattctttgaaccaagaaatagacaaacgacgtgccgctgaacaaaagatccgt
tatcagcagagacacgatttgggcactggatttttaaatcgctccgcccttgaacacgaa
gcggaacacttcattaaagatgtaggtgtcagtccttcgctacaagccgcggccattcat
atcggctttacaaatggccgaaggattcagtcgaaatatggctacagctcgtgggagaca
gttttagtccaatatagtaaaaggctgggcgatttaagtcagtatcaacttctgaccgct
cgtcccacttccaccgacctagtgcttctacttgaatcgtctcaactcgagcgcgaccta
aactcgatcagccaccaattggttgaggtgagtcaatctgagtttgatattgacggcgac
aaacttcatctcaatgcgtacattggtatcagcactacaaacgatacactctgccccaaa
aacttacttaaatacgcttctgaagcgatgcaatcatgcaaagactcggggcataagttt
agctattactcgcaagccatcgccgacatacagaaacatatcaatcagatggaaagctat
ttacttcaagcagttcgtaacgatgacttgttgctctatttccaacctaaagtgtcacca
actacgcataaatggacaggcgctgaggcacttttgcgttggcgccaccctatcctcggc
gatatctctaatgaaacgctgattcatatggccgaacagaatgggctcatttttgaagtt
ggtagctttgttttacgtgcagccattcaaaaagcagccgaatgggccgagtatgttgac
gattttaaaatcgccgtcaacatatcggccatccagttgaaaaaccctcactttatcgag
cagattgaagatttgctcaatgcgtatcaattgccagctaaatttctggaactggaagta
actgaaagtggtttgattgctgatgaagtcacggctcgtaatactctgattgcattaaac
aatcttggagtgacattgtcacttgatgacttcggaactggttattcttcgttcaattat
ctgaagaaatttccctttgatgctatcaaagtggacaaaagctttgtccaacaactggat
gaaagtgaagaagacaaagagattgtgcgctcaatcattcacgttgctaagaagctaaat
ttaattgtaactgttgaaggtattgaaagtgaaacacatgaagacttcattattagtgaa
ggttgtgaatatggtcagggctacttttacggtaaaccgatgccatgcgatgaatttgaa
accggcctgctgagacaaaactacccagggaatacaaacattacctatcagtag
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