Vibrio coralliilyticus RE98: IX92_20840
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Entry
IX92_20840 CDS
T03444
Name
(GenBank) DEAD/DEAH box helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
vcy
Vibrio coralliilyticus RE98
Brite
KEGG Orthology (KO) [BR:
vcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcy03009
]
IX92_20840
Enzymes [BR:
vcy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
IX92_20840
Ribosome biogenesis [BR:
vcy03009
]
Prokaryotic type
rRNA helicases
IX92_20840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_19
AAA_30
Helicase_C_2
DUF4577
DUF1529
AAA_22
PRAI
Motif
Other DBs
NCBI-ProteinID:
AIW21453
UniProt:
A0AAN0VZ34
LinkDB
All DBs
Position
2:complement(1042575..1043951)
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AA seq
458 aa
AA seq
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MTTSFKSLNLRSELIETLNSLNYTEMTPIQQQALPIVLEGKDVIGQGKTGSGKTAAFTLG
LLSNLNVKRFRVQTLVLCPTRELADQVAKEVRTLARGIHNIKVLTLCGGMPMGPQIGSLE
HGAHILVGTPGRILDHLSKGRINLAEMNTLVLDEADRMLEMGFEEAIDAIIDEAPQFRQT
LLFSATFPKNIESLASKVMRDPQMIKVESTHQTTTIEQRFYKLNTTEERDDALEALLLTH
KPESSVVFCNTKKEVQKVTDELSHRGFSVVELHGDMEQREREQALTMFANKSASILVATD
VAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGVAFSFYSEKEEYRVARIDEY
MDIAISPAVLPEKPVERPFYPKMQTIQILGGKKQKVRAGDILGALTKQAGLDGKKIGKIN
ILPMVSYVAVEHEIVKPALKQLQNGKMKGRNFKARVMK
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
gtgacaacctcatttaagagcctgaatcttagaagtgaactgatagagacactgaacagc
cttaactacacggaaatgacgccgatacaacaacaggcgttgccgattgttcttgaaggt
aaagacgtgattgggcagggcaagacaggctcgggtaaaacagcggcgtttacacttggg
ttactgagtaatttgaacgttaaacgcttccgtgttcagaccttggtgctttgtccaact
cgcgagcttgccgatcaggtagcgaaagaggttcgtacactggcacgtggtattcacaac
atcaaagttctcacgttgtgtggcggcatgccgatggggcctcaaattggctcgctagag
catggcgcgcatatcttggtgggtacacctgggcgtattttggatcacctttctaaaggt
cgtatcaatctagctgagatgaacactttggttctggatgaagctgatcgaatgttggaa
atgggctttgaagaggctattgacgccatcattgacgaagcacctcaattcagacaaacc
ttattgtttagtgcgacgttcccgaaaaacattgagtcattagcatctaaagtgatgcgt
gatcctcaaatgatcaaagtggaatcaacgcatcagacaaccaccatcgagcagcgattc
tacaagttaaacacaacagaagagcgtgatgatgctctggaagcgctattattgacacac
aaacctgagtcgtcagttgtgttctgtaataccaagaaagaagtccagaaggtgaccgat
gagctaagccaccgtgggttcagcgttgttgagcttcatggtgatatggagcagcgtgaa
cgcgaacaggcattgaccatgtttgctaataaaagtgcctcaattcttgtagcgaccgac
gttgctgcacgtggccttgatgtagataacctagatgcggtgttcaattttgaattgtca
cgcgaccctgaagtgcacgtccatcgaattggccgtactggtcgtgcaggttctaaaggt
gttgcgttcagcttctacagtgagaaagaagaatatcgtgtcgcacgtattgatgaatac
atggatatcgctatctctccagctgtactaccagaaaaaccagttgagagacctttctac
cctaagatgcagacgattcagatcctgggcggtaagaagcagaaagttcgtgcaggggac
atattaggtgctctgacgaaacaggctgggttggatgggaagaaaatcggcaagatcaac
attcttccaatggtttcgtatgtggctgttgaacacgagattgtaaagccagcattgaag
cagcttcaaaacggtaaaatgaaagggcgcaactttaaagctcgtgtaatgaagtaa
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