Vibrio coralliilyticus RE98: IX92_21015
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Entry
IX92_21015 CDS
T03444
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
vcy
Vibrio coralliilyticus RE98
Brite
KEGG Orthology (KO) [BR:
vcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcy03400
]
IX92_21015
DNA repair and recombination proteins [BR:
vcy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IX92_21015
Archaeal homologous recombinant proteins
IX92_21015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
Trimer_CC
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AIW21485
UniProt:
A0AAN0VZC4
LinkDB
All DBs
Position
2:complement(1082907..1085948)
Genome browser
AA seq
1013 aa
AA seq
DB search
MKPLSLTMQAFGPFANTETIDFTLLGSNPLFLINGPTGSGKTSILDAICFALYGQTTGNE
REGTQMRCDMAAVSLPTEVVFEFALKDKRYRVTRSPDQLAPKARGEGTTTRKHTASLYEI
TNEEQLITSKTAQVKVEVAELIGLNETQFRQVMVLPQGKFRELLLASSKEREEIFGQLFQ
TDIYKKIEFALKDKASAISKSKDEFDNQIRGALQVAEASTEQELTEQLDVVAKLLEEVSL
SEKVALEKLNKNKEAQQKANQLQGEFEKLQSAEKALSEHSEKSDSNAQIQQKLAIAQQAS
KLDVPYTNWTSLSKQVHDLTEKGSSLEKALQLSNVAIEEHKQQLDTYTLQAQSIPTLTDK
LYQLEGIKVKLNEKLELDKSLKDSVAKKQEFNATLIKYQAHKEKLLQEASKAQQELENAK
LAIAGKATVESELARLQRLTADLNKLQLLFKELVTLEQGLQPIQARVKQLKVDWQEHSKQ
ADEYEMRWHNAQAAVLARKLQQGMPCPVCGSDDHPNPASFDGQEVTKEQVEFYRNQERQS
LNSLNEQTRIEEQQNALISRQKTQIEAFQEELGEHRDLSLDLVQNQYSECQAKLAGLVSI
NLEQMESEVATLNQRCEKGENEINRLREEMSAHDATIQALQQRLDMLVQSIGEQHQSVES
VDNEYKQTKASIDTLQKQLEHANEQQQRLAKHHAELEGQRQSNTQLLAEAKRSLDKAETK
WHVSIEEAQFADEQAYLNSKATDEQIERWKAAVEAHAKTEVKLKQTLEDLRHTLKDQQVP
DLVELGKLVELSSQEYVEARNALDTTRSKFERFEKVRRDIVLLHEKNAKLEAEYRVYGTL
YDVASGKTGSRVSLHRFVLGVLLDDVLIQASQRLSLMSKGRYILARKTEGFKGSAGRGLD
LMVEDSYTGKNRDVATLSGGESFMAALSLALGLSDVVQSYSGGIRLDTLFIDEGFGSLDP
ESLDLAIQTLIDLQQSGRTIGLISHVSELKEQMSLRIDVKSSRVGSELKVNVA
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccattatcactgacaatgcaggcatttggtccttttgctaacaccgaaaccatc
gactttacattgcttggttccaatccgttgtttttgattaacggcccaacaggttcaggt
aagacttcaattttagatgctatttgttttgctttgtacggccaaacaacgggtaatgaa
agagaagggacgcagatgcgctgtgatatggcagcagtttcgttaccgaccgaagtggtg
ttcgagttcgcacttaaggataagcgctacagagtcacgagatcacccgatcaactcgcg
cctaaagccagaggtgaaggcacaacaacacggaagcacactgcctctttgtatgagatt
acgaatgaagagcagctgataaccagcaagacagcgcaggttaaagttgaggtcgcagaa
ctgattggtctgaatgaaactcagtttcgtcaggtgatggtgttaccacagggcaagttt
cgtgaactcttgcttgcaagctccaaagagagggaagagatcttcggtcaattgttccag
actgatatttacaagaaaatcgagtttgcgctgaaagacaaagcgagcgcgatcagcaaa
tcaaaggatgagtttgataaccagattcggggtgccctgcaagtggcagaagcaagcact
gaacaagagttaacggagcaacttgatgttgtcgccaagctgcttgaagaggtgagcttg
agtgaaaaggttgcccttgaaaagttgaataaaaacaaagaagcacaacagaaagctaat
caattacaaggtgaatttgaaaagctgcaaagcgcagagaaagcgctgtcagagcatagt
gagaaaagcgatagcaacgctcaaattcaacaaaaattggccatcgctcagcaagcttcc
aagctagacgtgccttataccaactggacttcactctcaaaacaggtccatgatctaact
gaaaaaggcagttctcttgagaaagcgttgcaactttcaaatgttgcgatagaagagcac
aaacagcagttggatacgtatacgctgcaagctcaatcaattccgacattgacagataag
ctttaccaattagaaggcattaaagttaagttaaacgaaaagttggagttggataaaagc
ctgaaagattctgtcgccaagaaacaagagttcaatgcgaccttaatcaaatatcaggcg
cataaagaaaagctattacaagaagcatctaaagctcaacaagaacttgagaatgcgaag
ctagccattgcaggtaaagcgacggtggagtctgaacttgcacgcttacagcgtcttact
gctgacctcaataaactgcagttgttgtttaaggaattggttactttagagcaaggtctt
cagcccattcaagctcgtgtaaaacagttgaaggtcgattggcaagagcatagcaagcaa
gcggatgaatatgaaatgcgctggcataatgctcaggcagcggttcttgctcgtaagctt
caacaaggtatgccatgccctgtgtgcggcagtgatgatcacccgaaccctgcttcgttt
gatggtcaagaagtgactaaagagcaagtggagttttatcgtaaccaagagcgtcagtcc
ctgaactctttaaacgaacaaactcgcattgaggaacaacagaatgcccttatctctcgt
caaaaaactcaaattgaagcgtttcaggaagagttgggggagcatagagacctctcttta
gatctcgtacagaaccagtactctgaatgtcaggctaagttagctggattggtttcaatt
aaccttgagcagatggagtcggaggttgcaacgctcaatcaacgctgtgaaaaaggtgaa
aatgaaattaatcgcctgagagaggagatgtctgctcatgatgcaacaattcaggcgctt
caacagcggttagacatgctcgttcagtccattggtgaacagcatcaatctgtggaatct
gtcgacaatgaatataagcaaaccaaagcgtcaatcgatactttgcaaaagcaactagaa
cacgccaatgaacagcaacagcgacttgctaagcatcatgcagagcttgaagggcaaaga
cagagcaacacacagcttttagcggaagcaaaacgcagcttagataaagcagaaacgaaa
tggcatgtctcaattgaagaagcacagtttgcggatgagcaggcttacctaaacagtaag
gcgacggatgaacaaatagagcgttggaaagcagcggtcgaagctcacgcgaaaactgaa
gttaaactgaaacagacgttagaggatttgaggcatacgcttaaggaccagcaagtgcca
gatttggttgagctaggaaaacttgttgaattgagcagccaagagtacgttgaagcgaga
aatgcactagatactactcgttcgaagtttgaacgatttgagaaagttcgtcgtgatatt
gtcttactgcacgaaaaaaatgcgaagttggaagctgagtacagggtgtatggaaccctg
tatgacgtcgctagtggtaagactggaagtcgggttagtttgcatcgatttgttcttggc
gtattgctggatgatgttctaatccaagcatctcagaggctcagcctgatgagtaagggg
cgctacattcttgcgcgtaaaaccgaaggcttcaaaggttcggcaggacgaggcttggat
ctgatggtagaagatagttacacaggcaaaaatagggacgttgcaaccttatcagggggg
gaatctttcatggcagcgctgtctttagctcttggtttatccgatgttgttcaatcgtac
agcggtggtatcaggttggatacgctgtttatcgatgaaggttttggcagcttagatcca
gagtcgttagatctcgccatccagacgctaattgacctgcagcaaagtggtagaaccatc
ggtttaatttcccatgttagtgagcttaaagaacagatgtcattgcgtatcgatgtgaag
tccagccgagtgggaagcgaattgaaagtaaatgtcgcataa
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