Vibrio coralliilyticus RE98: IX92_22265
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Entry
IX92_22265 CDS
T03444
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
vcy
Vibrio coralliilyticus RE98
Brite
KEGG Orthology (KO) [BR:
vcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcy03016
]
IX92_22265
Enzymes [BR:
vcy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
IX92_22265
Transfer RNA biogenesis [BR:
vcy03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
IX92_22265
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Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
DUF7716
Motif
Other DBs
NCBI-ProteinID:
AIW21712
UniProt:
A0AAN0VZN5
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All DBs
Position
2:complement(1347902..1349905)
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AA seq
667 aa
AA seq
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MFQDNPLLAQLKQQIQETLPKKEGTIKATEKGFGFLEVDSKTSFFIPPPYMKKCMHGDKV
KAIIRTEKEREVAEPEELLEQGVTRFIGRVKLFKGKLNVAPDHPQLKKLSLKARVKKGLK
SDDFKEGDWVVAHLIRHPLKGDNGFFVEISEKITDADDKIAPWWVTLAQNDLPNSEPAGI
DNWEIKDDADLERVDMTHVPFVTIDGESTKDMDDALYAKKTETGDFELTIAIADPTAYIT
PDSDMDKVARERGFTIYLPGRNIPMLPRDLADELCSLIENEERPALCCTVTISKDGVIGD
DVKFFAANIKSHARLAYDHVSDWLETGQSEAWQPTEEIAEIVRDLYEFSKARAEWRETHA
VVFPDRPDYRFELSEDNDVVAIHADMRRSANRLVEESMITANICAGKALKASFDSGVFNT
HAGFKPEKIADVIELVNPEGELPFTAESVVTLEGFAELRRWLAKQETSYLDNRIRKYQAY
SEIGNQPLPHYAMGLELYATWTSPIRKYGDMINHRMLKAHILGKAPVQTADESVGEELAL
HRKHHKIAERNVGDWLYARTLAEEPAKETVFNGEIFDVSRAGIRVRLIENGAAAFVPGSL
ILANKERLECNGEAGTVSIDKEVIYRLGDVVELVLNDVNQETRSIVAKPTQVFEDVKAPE
AAETPAE
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgttccaagataaccctctactggctcaacttaagcagcaaatccaggaaacccttccg
aagaaggaaggcacgatcaaagcgactgaaaaaggctttggtttcttagaagtcgacagc
aagaccagcttctttattccgccgccatacatgaaaaaatgtatgcatggtgacaaagta
aaagccatcatccgcacggaaaaagagcgcgaagtggcggagccagaagagctgttggaa
caaggcgtaactcgctttatcggccgcgttaaactgtttaaaggcaaactgaatgttgcg
cctgatcacccgcaacttaaaaaactctctttgaaagctagggtcaaaaaaggcttaaaa
agtgacgattttaaagaaggtgactgggttgttgcgcatttaattcgccacccactaaaa
ggtgacaacggcttttttgtcgaaatctcagagaagatcactgatgcggacgacaaaatc
gcgccttggtgggtaacgttagcgcaaaatgatttgccaaacagtgaacctgcaggtatc
gacaactgggaaatcaaagacgacgcggatttagaacgtgtcgacatgacacatgtgccg
tttgtgactatcgatggtgaatcaaccaaagatatggacgatgcactgtacgcgaagaag
actgaaactggtgattttgagctgacaattgcgattgccgacccaacggcttatatcacg
ccggacagcgatatggacaaggtcgcccgagagcgcggctttaccatttatcttccgggt
cgcaacatcccgatgctaccgcgtgatttggctgatgagctgtgttctctgattgagaac
gaagaacgtccggctctttgctgtacagtaacaattagcaaagatggtgttattggcgat
gacgttaagttcttcgctgcgaacattaaatctcacgcacgtctggcttatgatcatgtg
tctgattggcttgaaacaggtcaatctgaagcgtggcagccaactgaagagattgctgaa
attgttcgtgacttgtatgagttttctaaagctcgcgctgagtggcgtgaaacacacgca
gtagtgttcccagatcgccctgattaccgattcgagctaagtgaagataacgacgtcgta
gctattcatgcagatatgcgccgctcagcgaatcgcttggttgaagaatctatgattacg
gcaaacatctgtgcaggtaaagcgctgaaggcgagctttgattcaggtgtatttaatact
cacgcaggtttcaaaccagaaaagatcgctgacgtgattgagctggttaacccagaaggt
gagctgccatttaccgctgagagtgtggtgactctggaagggtttgcggaacttcgtcgc
tggttagcaaaacaagagacgagttacctcgataaccgtattcgtaaataccaagcttac
agcgaaattggtaaccaacctttgcctcactatgcaatgggcttagagctgtacgcaaca
tggacctctccaattcgtaagtacggtgacatgattaaccaccgtatgctgaaagcacac
attctaggtaaagcgccggtacaaacagcggatgaaagtgttggcgaagaactcgcactg
catcgtaaacaccataagattgcagagcgcaatgttggtgattggttgtatgcccgcacg
ttagctgaagaaccggcaaaagagacggtatttaatggcgaaatctttgacgtgtctcgt
gcaggcattcgcgttcgcctgattgaaaatggtgctgcggcgtttgttccaggctccttg
attctggcaaacaaagaacgtctagaatgcaatggtgaagcgggtactgtatctatcgat
aaggaagttatctaccgtttgggtgatgtggttgagttggtattgaatgatgtcaaccaa
gaaacacgcagtattgtcgcgaagccaactcaagtctttgaagatgtaaaggcacctgaa
gcggcagaaacaccagcggaataa
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