Vibrio coralliilyticus RE98: IX92_27825
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Entry
IX92_27825 CDS
T03444
Name
(GenBank) peptidase C39
KO
K12530
ATP-binding cassette, subfamily B, bacterial RtxB
Organism
vcy
Vibrio coralliilyticus RE98
Pathway
vcy02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vcy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IX92_27825
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcy02000
]
IX92_27825
02044 Secretion system [BR:
vcy02044
]
IX92_27825
Transporters [BR:
vcy02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
IX92_27825
Secretion system [BR:
vcy02044
]
Type I secretion system
RTX toxin transporter
IX92_27825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
Peptidase_C39
AAA_29
AAA_18
AAA_22
ABC_ATPase
DUF87
AAA_30
Cytidylate_kin
AAA_21
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AIW22990
UniProt:
A0AAN0SIR7
LinkDB
All DBs
Position
p319:134021..136093
Genome browser
AA seq
690 aa
AA seq
DB search
MTCFNLLFNLTGQEINQNKSQLSASNCHQLITEFNQANNVSLTLKRVRFSNIEKIPLPIV
YFDKNYGSVVLANLSTEKALIQSPDAASPEIISREELKARWSGEVILNTTGGSRFDVSWF
IPAFVHHRHLIGEVLLFSLMLQFLALATPLFFQVVMDKVFVHKALSTLDVLVVVLVVVGV
FEVILKGLREYLFAHTTNRMDVVLGVKLFKHLLGLPLAYFKHRQVGAIITRVQELDSIRD
FLTGSMLTLCVDMVFTVVFFAVMAWLSLPLTALVLGVLPLYFLLAWLSTRPLQQRIEKQF
QTAAQNTSFLNESVSGAETIKSLAVEPRMMRRWEAQTADMVEAGFRTQTLNSVVSHCVMV
LQKTTSVVVIWLGANMVISLELTIGQLIAFNMMVSHVSQPIAKLIDLWQQFVQTRVAVDK
LGDILNLPVEQEMGNHQPNTAINGEIEMRNLVFRYQPDQAPVLDGVSLHIHPGETLGIVG
PSGSGKSTLTRLLQKLYVADEGDILIDGHPLSQLAPGYLRRNIGVVLQENYLFNLSVRQN
IAFKHPAASLEDVIHAAKLAGAHAFILQLPLGYDTVLAEAGSSLSGGQKQRLAIARALMG
DPRILIFDEATSALDDESQALIQANMAEISSGRTVVTVAHRLSTVRHCDRIITLEKGQIT
ESGKHEQLLALDGCYSKLWQLQQELRKDAL
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
attacctgttttaatttactttttaatttaacagggcaagaaattaatcaaaataagtca
cagttatccgcttcgaattgtcaccaattaatcactgaatttaatcaagctaataacgtt
agtttgacattaaagcgtgttagattctctaatattgagaaaatacccttgcccattgtt
tatttcgataaaaactatggcagtgtggttctggccaacctatcgacagagaaagcgtta
attcaatctcctgatgcggcttccccagaaataatctcgagagaagaattaaaagcgcgt
tggtcaggggaagtgatattaaatacaacaggcgggagccggtttgatgtgtcctggttt
atccccgcttttgttcaccatcgtcatcttattggtgaagtcctcctgttttctttgatg
ctgcagtttcttgcgctagcgaccccgctgttttttcaagtggtgatggataaagtcttc
gtgcataaagcgttgtccacactggatgtgttggtcgtggtgttagtggtggtcggtgtt
tttgaagtgatcttaaaagggctgcgtgaatacctgtttgcgcataccactaaccgcatg
gatgtggtgctgggagtgaagctatttaaacaccttctaggcttgccactggcctacttc
aaacaccgtcaggtgggcgccatcatcacccgagtacaagagttggacagcattcgtgat
tttttaaccgggtcgatgctgacgttgtgcgttgatatggtgtttaccgtcgttttcttt
gcggttatggcttggctatctttgccattgacggcgttagtactgggtgtacttcccttg
tattttctgctggcttggctgagtactcgccctttacagcagcgtatcgaaaagcaattt
caaacggccgctcagaatacctcctttttgaatgagtcggtcagtggcgccgaaacgatc
aagagcttggcggtcgagccgagaatgatgagacgttgggaagcgcaaacggccgatatg
gtcgaagcgggctttcgcacccagaccctgaatagcgttgtcagtcattgtgtcatggtg
ttgcaaaagaccacgagcgtcgtcgttatttggcttggcgcgaacatggtgatttcattg
gagctcaccattggtcaactgatagcgttcaatatgatggtgtctcatgtgagtcagccg
atcgcgaaactcatcgatctatggcagcagttcgttcagacccgagtcgctgtagacaag
ttgggcgatatcctcaatctccccgtcgaacaagaaatgggtaaccatcaacccaacacc
gcgatcaacggtgaaatagaaatgcgcaatctggtctttcgctatcaacccgatcaggcg
ccagtactggacggcgtgtcgctgcacattcatccgggtgaaacactgggtattgtcggc
ccatcaggatcgggcaaaagtacgttaacgcgcttactgcaaaaactgtacgtggcagat
gaaggcgacatccttattgatggacacccgttgagccagctagcgccgggttatttgcgg
cgcaatatcggggttgtactccaagaaaactacctgtttaacctgagcgtgcgtcaaaac
attgcgtttaaacacccagccgcctcattggaagacgtcattcatgccgccaagctggcc
ggagcgcatgcctttattttgcagctcccattaggctatgacactgttttggcggaggcg
ggaagctcattgtcaggagggcagaagcagcgtctggcgattgcccgtgccttaatgggg
gatccgcgtattttgatctttgacgaggcgaccagtgcgctcgacgatgaatctcaagcc
ctgatccaagccaatatggcggaaatatcatcggggcgaacggtggtgacggtggcgcac
cgactgtctacggtccgtcattgtgatcgcatcatcacgctcgaaaaaggccaaatcacg
gaatcaggcaaacatgagcaattgttggcccttgacggttgctattcgaagctgtggcag
ctccaacaagaactgcgtaaggacgcgttatga
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