Vibrio cholerae O27 10432-62: VAB027_1066
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Entry
VAB027_1066 CDS
T03829
Name
(GenBank) asnC-type helix-turn-helix domain protein
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
vcz
Vibrio cholerae O27 10432-62
Brite
KEGG Orthology (KO) [BR:
vcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcz03000
]
VAB027_1066
03036 Chromosome and associated proteins [BR:
vcz03036
]
VAB027_1066
Transcription factors [BR:
vcz03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
VAB027_1066
Chromosome and associated proteins [BR:
vcz03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
VAB027_1066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
MarR
MarR_2
HTH_34
HTH_20
Fe_dep_repress
LexA_DNA_bind
HTH_IclR
E3_UFM1_ligase
NirdL-like_HTH
DDRGK
HTH_Crp_2
HTH_27
SCP2
Motif
Other DBs
NCBI-ProteinID:
AKB08005
UniProt:
A0A1X1LGS4
LinkDB
All DBs
Position
1172108..1172590
Genome browser
AA seq
160 aa
AA seq
DB search
MSLDRVDRDILRILHAKGRLPVVELAKLVNLTTSPCSERVKRLEKEGYIRGYHADLDPGK
LGLDVQVFIHIRLDQSSFSIFERFAHAVADIPEIEACYSLSGDFDTMIKVRVKDMKAYQA
FMSGKLGSLPGVIQTRSEFVIEEHKTSFGINPELIYSLPS
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
atgagtctggatcgagttgaccgcgatattttgcggatcttacatgccaaagggcgttta
ccggtcgttgagctggccaagttggtgaatctcacaacatcgccctgttcagagcgggta
aagcgtttagaaaaagagggatacattcgcggttaccacgcggatctcgatccgggaaag
ttaggcttggatgtgcaggtctttatccatattcggcttgatcaaagcagcttctcaatt
tttgaacgttttgctcatgctgttgcggatatcccagaaatcgaagcctgttactcgctc
tctggtgattttgacaccatgattaaagtacgcgtcaaagacatgaaagcgtatcaagcc
tttatgtcgggcaagttgggctctttacccggcgtgattcaaacccgtagtgagtttgtg
attgaagagcacaaaaccagttttggtatcaaccctgagctgatttacagcttgccaagt
taa
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