Vibrio cholerae O27 10432-62: VAB027_107
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Entry
VAB027_107 CDS
T03829
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
vcz
Vibrio cholerae O27 10432-62
Pathway
vcz00300
Lysine biosynthesis
vcz00470
D-Amino acid metabolism
vcz01100
Metabolic pathways
vcz01110
Biosynthesis of secondary metabolites
vcz01120
Microbial metabolism in diverse environments
vcz01230
Biosynthesis of amino acids
Module
vcz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vcz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VAB027_107 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VAB027_107 (lysA)
Enzymes [BR:
vcz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
VAB027_107 (lysA)
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Paralog
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF1955
Motif
Other DBs
NCBI-ProteinID:
AKB07759
UniProt:
A0A085SUQ9
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All DBs
Position
111820..113073
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AA seq
417 aa
AA seq
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MDYFNYQEDGQLWAEQVPLADLANQYGTPLYVYSRATLERHWHAFDKSVGDYPHLICYAV
KANSNLGVLNTLARLGSGFDIVSVGELERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKI
KCFNVESEPELQRLNKVAGELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDRAA
QVYRLAHSLPNLDVHGIDCHIGSQLTALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGG
LGVVYRDELPPQPSEYAKALLDRLERHRDLELIFEPGRAIAANAGVLVTKVEFLKHTEHK
NFAIIDAAMNDLIRPALYQAWQDIIPLRPRQGEAQTYDLVGPVCETSDFLGKDRDLVLQE
GDLLAVRSSGAYGFTMSSNYNTRPRVAEVMVDGNKTYLVRQREELSSLWALESVLPE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
ttggattacttcaattatcaggaagatggtcagttgtgggctgagcaagttccactcgcc
gatttggcaaaccagtacggtacaccgctttatgtatactcaagagcgacacttgagcgc
cattggcacgcgtttgataaatcagtcggtgattatcctcacctaatttgttatgcggtg
aaagccaactctaacttaggggtattgaatactttagctcgtttgggttccggttttgat
atcgtctccgttggcgaattagagcgtgtattggccgccggtggtgacccaagcaaggtg
gtattctctggtgtgggtaaaaccgaagctgagatgaagcgcgccctgcaattgaagatc
aaatgctttaacgtggaatcggagcctgagctgcagcgcctgaataaagtggccggcgag
cttggtgttaaagcgccaatttcactgcgcatcaatcctgatgtggatgccaaaactcac
ccttacatttcaacgggcctgcgtgataacaaatttggtatcacctttgaccgcgcagcg
caggtgtatcgcttagcgcacagcttacccaacctcgatgtacatggtattgattgccat
atcggctcacagctaaccgctctcgcaccgtttattgatgcgactgaccgtttactggca
ctgattgattcgctgaaagcggaaggcattcatatccgccacttggatgtcggcggtggt
ttaggggtggtttatcgtgatgaactgcctccacagccttcggagtacgccaaagcattg
ctggaccgcctagagcgccaccgcgatttagagctgatttttgaaccgggacgcgcgatt
gcggctaacgcgggagtattggtgactaaggtggagtttctcaaacacactgagcacaaa
aacttcgcgatcattgatgcggcgatgaacgatttgatccgccctgcgctataccaagcg
tggcaagacatcattccactgcgtccgcgccaaggcgaagcgcaaacctatgatttggtt
ggcccggtgtgtgaaaccagtgatttcctagggaaagatcgcgacttagtgttgcaagag
ggagatttactggcggtgcgttcttcaggtgcgtatgggttcaccatgtcgtcgaattac
aatacccgtccgcgagtggctgaagtcatggttgatggcaataaaacctatttggtgcgt
cagcgtgaagagcttagcagtttgtgggcgttagaatcggtattaccggagtaa
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