Vibrio cholerae O27 10432-62: VAB027_1358
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Entry
VAB027_1358 CDS
T03829
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
vcz
Vibrio cholerae O27 10432-62
Brite
KEGG Orthology (KO) [BR:
vcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcz03021
]
VAB027_1358
Transcription machinery [BR:
vcz03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
VAB027_1358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
AAA_34
Helicase_RecD
AAA_22
WWE
Motif
Other DBs
NCBI-ProteinID:
AKB06289
LinkDB
All DBs
Position
1462561..1465470
Genome browser
AA seq
969 aa
AA seq
DB search
MSFALGQRWISDTESDLGLGTVVALDARTVTLMFAASEENRVYARSDAPVTRVIFNVGDV
VDSQQGWSLQVEQVVEDQGVYTYLGTRVDTEESGVALREIFLSNQIRFNKPQDKLFAGQI
DRMDNFVLRYRALANQYQQHKSPMRGLCGMRAGLIPHQLYIAHEVGRRHAPRVLLADEVG
LGKTIEAGMIIHQQVLTGRAERILIVVPETLQHQWLVEMMRRFNLHFSIFDEERCVEAFS
EADNPFETQQYVLCSLDFLRKSRQRFEQALEAEWDLLVVDEAHHLEWHPEKPSREYQVIE
ALAEQTPGVLLLTATPEQLGRESHFARLRLLDADRFYDYEAFVKEEEQYAPVADAVTALF
SGEKLSDEAKNKITELLSEQDVEPLFKALESHASEDEIALARQELIDNLMDRHGTGRVLF
RNTRAAIKGFPVRNVHLLPLEIPSQYTTSMRVAGMLGGKLTPEARAMKMLYPEEIFQEFE
GEESSWWQFDSRVNWLLEKVKAKRSEKILVIASRASTALQLEQALREREGIRATVFHEGM
SIIERDKAAAYFAQEEGGAQVLICSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLD
RIGQKRDIDVYVPYLTETSQAILARWFQEGLNAFAETCPTGRAVYDVFAERLIPILAAGG
GEELEVIIEESAKLNKMLKSQLEVGRDRLLEMHSNGGEKAQQIAEQIAKTDGDTNLVTFA
LSLFDAIGLHQEDRGENALVVTPAEHMMVPSYPGLPYEGATITFDRDTALSREDMHFISW
EHPMVQGGIDLLMSEGVGTCAVSLLKNKALPVGTILLELVYVVDAQAPKRSGISRFLPVS
PIRILMDARGNDLSSQVEFESFNRQLSPVNRHLASKLVSSVQHDVHRLITASETAVEPRV
SAIREQAQRDMQQSLNSELERLLALKAVNPNIRDEEIEVLEQQIKELTGYIAQAQYQLDS
LRLIVVAHN
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgctttagggcaacgctggataagcgatacggaaagtgatctcgggttaggt
actgtggtggcgcttgatgcgcgtacagtgaccttgatgtttgcagcatcggaagaaaat
cgtgtgtatgcacgttcagatgcgccggtcacccgtgtgatctttaatgtcggcgatgtg
gtggatagtcagcaaggctggtcgttacaagttgaacaagtggtggaagaccaaggcgtc
tacacctatctaggtacgcgagtggataccgaagaaagcggtgtcgcgctgcgtgaaatt
ttcctcagtaaccaaattcgttttaataaaccgcaggataagttgtttgccggtcaaatc
gatcgcatggacaactttgtgctgcgttatcgcgctctagccaatcaatatcaacagcac
aaaagcccaatgcgtggcttgtgtggtatgcgcgctgggctgatcccgcaccagctgtac
atcgcccatgaagtaggtcgccgccatgcaccacgcgtgttactggccgatgaagtcggt
ttgggtaaaaccattgaagcgggcatgatcatccatcagcaagtgctgacgggacgtgct
gaacgcatcctgattgtggtgcctgaaacgctgcaacaccaatggttggtggagatgatg
cgccgtttcaacctgcacttttcgatttttgatgaagagcgctgtgtggaagcctttagc
gaggccgataacccatttgaaactcagcagtatgtactgtgttcactcgattttttgcgt
aaaagccgccagcgttttgaacaagccttggaagcggaatgggatttgttggtcgtcgat
gaagctcaccatcttgagtggcacccagaaaagccaagccgcgaatatcaagtgattgaa
gcgctcgcagagcaaacgccgggcgtactgctattgacggcaacgcctgagcagttaggt
cgtgaaagccactttgctcgtctgcgcctgctggatgcagaccgtttctacgattacgaa
gcctttgttaaagaagaagagcaatacgcacccgttgccgatgccgttactgcgctgttc
agcggtgagaagctgagtgatgaagcgaaaaacaaaatcactgagcttctgtctgagcag
gatgtcgagccgctatttaaagcgttggaaagccacgccagcgaggacgaaattgctttg
gctcgccaagagctgattgacaacctgatggatcgccacggtactggtcgcgtgctgttc
cgtaacacgcgtgcagcaatcaaaggcttcccagtgcgtaatgtgcatttgctgccattg
gagatcccttctcaatacaccacgtcaatgcgtgttgcgggaatgcttggcggtaaactg
acgccagaagcgcgcgcgatgaaaatgctctacccagaagagattttccaagagtttgaa
ggcgaggagtcaagctggtggcaatttgactcacgcgtcaactggctgctcgaaaaagtc
aaagccaaacgcagcgagaagatcctcgtcatcgcttcacgtgccagtaccgcattgcag
ctagagcaggcactgcgtgagcgtgagggtatccgcgcaacggtattccatgaaggcatg
tcgatcattgaacgcgataaagccgcggcttattttgcccaagaagagggcggcgcacag
gtgctgatctgtagtgaaattggctcggaaggtcgtaacttccagtttgctaaccagttg
gtgatgttcgatctgccgtttaacccagatttgctagagcagcgtatcgggcgtttggat
cgtattggtcaaaaacgtgatatcgatgtgtatgtgccatatctgaccgaaacgtcacaa
gcgattttggcgcgttggtttcaagaaggtttgaatgcctttgcggaaacctgcccaacc
ggtcgtgcggtgtatgatgtcttcgctgagcgtttgatccccattctggccgccggtggc
ggtgaagagttggaagtgatcatcgaagagtcagccaagctcaacaaaatgctgaaatcg
cagctggaagtggggcgtgatcgcttgctggaaatgcattctaacggtggcgaaaaggcg
cagcagattgccgagcagatcgcgaaaaccgatggcgataccaatctggtgacgtttgct
ttgagcctgtttgatgcgattggtctgcatcaagaagatcgtggtgagaatgctctagtg
gtcactcctgcagaacacatgatggtgccaagctatccgggtctcccttatgaaggagca
accattacctttgatcgtgacaccgcactgtcgcgtgaagatatgcacttcatcagttgg
gaacaccccatggtacaaggtggcattgatttactgatgagtgaaggggtgggcacttgc
gcggtgtcgctgttgaaaaacaaagcactgccagtgggtaccatcttgctggagctggtg
tatgtggtggatgcccaagcgccgaaacgcagtggcatcagccgcttcttgccagtctct
ccaatccgaattctgatggatgcgcgcggtaatgatctctcttcgcaagtggagtttgaa
agctttaaccgtcagctcagccctgtgaatcgtcatttggccagcaagctggtgagttca
gtacagcatgacgtgcatcgtttgattacggcaagcgaaaccgcggttgaaccacgagtg
agcgcgattcgtgaacaagcgcagcgtgatatgcagcagagcctcaacagcgagttggag
cgtttgctggcactcaaagcggttaacccgaacattcgtgatgaagagatcgaagtgcta
gagcagcaaatcaaagagctgactggctatattgcgcaggcgcagtatcagctggattca
ctgcgtttgattgtggtggcacacaactga
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