KEGG   Vibrio cholerae O27 10432-62: VAB027_1622
Entry
VAB027_1622       CDS       T03829                                 
Name
(GenBank) repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella family protein
  KO
K20952  rugosity and biofilm structure modulator C
Organism
vcz  Vibrio cholerae O27 10432-62
Pathway
vcz05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vcz00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    VAB027_1622
SSDB
Motif
Pfam: Beta-prism_lec Crystall_4 FG-GAP_3 FG-GAP PHA_synth_III_E Beta-prop_BBS7
Other DBs
NCBI-ProteinID: AKB08022
LinkDB
Position
1726137..1729010
AA seq 957 aa
MTSHYIALAVGLLSLSSTVAQATTNEAEGCIISRLNGEKYCLKVGERSGYSLPSWIYAHP
VDVQAPSGVSVMLSDWDNLSYNRLAVFDRYTGNEDLKNVKAYNGAYLDFSKPRSMRVLAS
ETYPEACIVSRQTGERFCLKEGERSGYSLPAYIYGHEVDVEAPLGLRVMLSDWDNLSYNR
LAVFGGNTQNEQMRAVKAYNGETLDFSKPRSMRVVPYDGDSSALNMKLKWSWQGSAFQPN
SNQVMVTPIVAQLNDDNGDGKIDEKDVADLIVVTFEGNKYANGGLVRALSGVDGSELWSY
ANGGVIADARYSPAVGDLDGDGIVEIVTTNNREQFITILDNQGNIKKQIPTTESGWRIVG
DITLADLDHDGSVEILAADGVYNYHTGLVFNHPWAPSSINVDVDGDLQQEVFSGGTLFQN
NGAINWQYQANDAVWFSSLVNLDNDAEPEIVASVPATFATGDNARFAVLEHDGTIKWEIN
NTANPGGGVQAVSNFLGKAQAVETSKFSKVYGYQPNNNPASIALAVDGKISVRSGFAIDA
IGASASTLVGGTGGNLNAAVNVKDIKAIDLTWGKYYWGGYHLLALDFRMSNGSVISMGSK
SYAYSKQTERFTVPAGSRIKGIKAWTAGWLLDGVQFELATQNGTNDLDVKGIVYAGYAAV
DMYNSKGERVWSVANDDTGSGKIGVSAYDFDNDGIDEVLVQDHARVRVLDGKTGKERASL
AHSTATLWEYPIVVDLEGDNNAELIVAANDFDRQYSINHGVYVYQSADSAKPWKNATRIW
NQHAFHLTNINQDGTLPTFVEPSWLSHNTYRSSTLRAAVGGESPIFGYSNTQQSQRVVTA
DNQMYLRSGFAIDAIGTTVNNLVGGPVQGTNGGVLRAPIALDQLQSVEVTSGLYNWGGYH
IVAIKFTMKDGSSVLLGSTHYASNKKVETYTVPQGKRIKQINVWTGGWLVEGFQFVY
NT seq 2874 nt   +upstreamnt  +downstreamnt
atgacgtctcactatattgcacttgctgtcggtcttttgtcgttaagtagtaccgtggct
caagccacaacgaatgaagccgaggggtgtattatcagccgcctgaatggcgaaaaatat
tgtttaaaagtgggagagcgctcgggctactccctccctagttggatttatgctcatcca
gtagatgttcaggctccgagtggtgtctctgtcatgttaagtgattgggataacctgtct
tataaccgtttggcggtgttcgatcgttatactggtaacgaagatcttaagaatgtcaaa
gcctacaacggtgcttatttagatttttctaaaccacgttcaatgcgagtactggcttct
gaaacttatcctgaggcttgtattgtgagtcgtcaaacgggtgaacgtttctgtttaaaa
gagggtgagcgctctggttactcgctaccagcgtacatttatggccatgaggttgatgtt
gaagcacctctaggtttgagggtcatgctgagtgattgggataacctttcatacaaccgt
cttgcggtgtttggtggtaacacccagaacgagcaaatgcgtgcagtcaaagcctacaat
ggcgaaacgcttgatttctcaaagccacgctcaatgcgcgttgtcccttatgacggtgac
agctcggcactcaatatgaagcttaagtggtcttggcaaggcagtgctttccaacctaac
tctaaccaagtgatggtaacgcctattgtcgcgcaactgaacgatgacaatggtgatggc
aagattgatgaaaaagatgtcgcagatttgatcgtagtgacgtttgaaggaaacaaatac
gccaatggcggcttagtgcgtgctttaagtggtgtggatggttctgagctatggagctat
gcgaatggtggtgtgatcgcggatgcgcgttattcgccagcggtaggcgatctggacggt
gacggaatcgttgagattgtgacaaccaacaatcgcgagcaattcatcacgattttggat
aaccaaggcaacattaaaaaacagatcccaacgacagaaagtggctggcgtattgtcggt
gatatcacgttggcggatttagaccacgatggcagtgtagaaattctggctgcagatggt
gtgtataactaccacaccggattggtctttaaccatccttgggcgccgtcctcgatcaac
gttgatgtcgatggcgatctgcaacaagaagttttttcgggtggtactctgtttcaaaat
aacggtgcgatcaattggcagtatcaagcgaacgatgcggtttggttctcttcgctagtt
aacttagataatgatgctgagcctgagattgtggcctctgtacctgccacttttgcgaca
ggcgataacgcacgttttgctgtgctagaacacgatggcaccattaaatgggaaatcaac
aacacagcaaacccaggtggtggtgtgcaggcggtatctaactttttaggtaaagctcaa
gccgttgaaacgagtaagttctcaaaagtctatggttatcagcctaataacaatcctgct
tcgattgctttggccgtcgatggcaagatctcggttcgttcaggatttgcgattgatgcg
attggtgcttctgcttcgacgttagtcgggggtacgggaggcaatcttaatgccgcggtt
aacgtcaaagatattaaggcgattgacctgacttggggtaaatactattggggtggttat
catctattagcgctcgattttagaatgagcaatggtagcgtgatttctatgggctctaaa
agctatgcttactccaagcagaccgagcgctttactgtgccagcaggtagccgcattaaa
ggcatcaaagcttggaccgcgggttggttgttggacggtgttcagtttgagttagctacg
caaaatggtaccaatgatctggatgtaaaagggattgtttacgcaggctatgccgctgtc
gatatgtataacagcaaaggcgagcgtgtttggtctgtggcgaatgacgacactggcagc
ggtaaaattggtgtctctgcgtatgactttgataacgatggtatcgatgaagtgctcgtg
caagatcatgcacgcgtgcgtgtattagatggcaaaacgggcaaagaacgtgcgtcgcta
gcgcactccacggcaacactttgggaataccctatcgtggtcgatctggaaggtgataac
aacgctgagttgatcgttgcagcgaacgatttcgatcgccaatattcgattaaccacggg
gtttatgtttaccaatcagcggacagtgcgaaaccttggaagaatgcgactcgtatttgg
aaccagcatgctttccatctcaccaacatcaatcaagatggtactttgccgacttttgtt
gagccaagttggttgagccataatacgtaccgttcaagcacattacgcgctgcagtgggt
ggtgagtctccaattttcggttactcaaatactcaacaatcgcaacgtgtcgtgacggcg
gataaccagatgtatctgcgttcaggttttgcgatcgatgccattggtactaccgtcaac
aacttagtcggcgggccggtacaaggcactaacggtggtgtgttaagagcaccgattgca
cttgatcaattgcaatcagtggaggtcacctctggcctttataactggggtggttaccac
atcgtggcgattaaattcacgatgaaggatggctctagcgtgttattgggctcaacccac
tatgcgagcaataagaaagtggaaacatacactgtgccgcaaggtaaacgtatcaagcag
attaatgtatggaccggcggttggttagttgaaggcttccagtttgtctactaa

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