Vibrio cholerae O27 10432-62: VAB027_1790
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Entry
VAB027_1790 CDS
T03829
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
vcz
Vibrio cholerae O27 10432-62
Pathway
vcz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vcz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
VAB027_1790 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vcz01007
]
VAB027_1790 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcz03016
]
VAB027_1790 (serS)
Enzymes [BR:
vcz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
VAB027_1790 (serS)
Amino acid related enzymes [BR:
vcz01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
VAB027_1790 (serS)
Transfer RNA biogenesis [BR:
vcz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
VAB027_1790 (serS)
Prokaryotic type
VAB027_1790 (serS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
ERM_helical
TMF_TATA_bd
CEP83_CC_1st
Spectrin
DUF1664
DUF3086
DUF7216
SBP_bac_4HB
Motif
Other DBs
NCBI-ProteinID:
AKB07003
UniProt:
A0A085TND3
LinkDB
All DBs
Position
1912506..1913813
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AA seq
435 aa
AA seq
DB search
MLDSKLLRTELDETAAKLARRGFKLDVETIRTLEEQRKSIQVEVENLQSTRNSISKQIGQ
LMASGDKAGAEAVKQQIGTLGDDLDAKKVELDAVMAQLDAITQTVPNIPDDAVPNGKDDS
ENVEVSRWGTPKTYDFEVKDHVDLGEMGDGLDFASATKITGARFVVMKGQFARLHRAIAQ
FMLDLHTDQHGYTELYVPYLVNAETLFGTGQLPKFGQDLFHTEPLTEKASDEEPRRLSLI
PTAEVPVTNLVRDTILDEAELPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI
TRPEDSMAALEELTGHAEKVLQLLELPYRKVILCTGDMGFGSCKTYDLEVWVPAQKTYRE
ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENYQEADGRIAI
PAVLQKYMGGLTHIG
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgctggattctaaattacttcgtactgagctggacgaaacagctgcaaaattggcacgt
cgcggttttaaactcgacgtggagactatccgtactcttgaagaacaacgtaagtccatt
caagtagaagttgagaatttacaatccacgcgtaactccatctccaagcaaatcggtcaa
ctgatggcgtctggcgacaaagcgggcgcagaagcggttaagcaacaaatcggcaccttg
ggtgacgatctggatgcgaaaaaagtggaattggatgcggttatggcgcaattggatgcg
atcacccaaaccgtgcctaacattccagacgatgcagtgccaaacggtaaagacgacagc
gaaaacgtagaagtttctcgttggggaacaccaaaaacttatgattttgaagtaaaagat
catgtggatttgggcgaaatgggcgacggtctggatttcgctagcgcaaccaagatcacg
ggtgcgcgttttgtggtgatgaaagggcaatttgctcgtttgcaccgtgctatcgcacag
ttcatgttggatctgcacaccgatcaacacggttacactgagctgtatgtaccttaccta
gtgaacgcggaaacgctgttcggtacaggtcaattaccaaaattcggtcaagatctgttc
cacacggagcctctgactgagaaagccagtgatgaagagccacgccgtctgtcactgatc
ccaaccgcagaagtgccagtgaccaacttagtgcgtgacaccattttggatgaagctgaa
ctgcctctgaaaatgaccgcacacacgccttgtttccgctctgaggcgggttcttacggt
cgtgatactcgtggtctgatccgtatgcaccagtttgacaaagtggaactggtacaaatc
actcgccctgaagattcaatggcggcattggaagagttgactggtcacgcagaaaaagtt
ctgcaactgctggagctgccttaccgcaaagtgattctgtgtacgggcgacatgggcttt
ggctcttgcaaaacttacgacttggaagtttgggttccagcgcagaagacgtaccgtgaa
atctcttcttgttcaaacatgtgggatttccaagcgcgtcgtatgcaagcgcgtttccgc
cgcaaaggtgagaagaagcctgagttggtgcacacgctgaacggctctggtctggcggtg
ggtcgtaccatggtcgcgattttggaaaactatcaagaagccgatggtcgcattgcgatt
cctgcggtactacaaaagtacatgggcggtttaacccatatcggttaa
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