Vibrio cholerae O27 10432-62: VAB027_1944
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Entry
VAB027_1944 CDS
T03829
Name
(GenBank) L,D-transpeptidase catalytic domain protein
KO
K21470
L,D-transpeptidase YcbB
Organism
vcz
Vibrio cholerae O27 10432-62
Brite
KEGG Orthology (KO) [BR:
vcz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vcz01002
]
VAB027_1944
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vcz01011
]
VAB027_1944
Peptidases and inhibitors [BR:
vcz01002
]
Cysteine peptidases
Family C82
VAB027_1944
Peptidoglycan biosynthesis and degradation proteins [BR:
vcz01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
VAB027_1944
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Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
AKB06731
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Position
2076810..2078381
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AA seq
523 aa
AA seq
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MKSRVVAAIALLFFVIPCSATQRFVELGWIDSTSPVNEQITNPALVEQIYHSNNDQLLWS
DLATANHFEAQLEVIHRASFSPLFSRQLFALKSYRQQDRWHEYDVLATDTLLQYLSYAEQ
APKIGIAWFFEGQLDQPLAPPSEEAQLALHMAIGNQSLARLMDEYTPQDPAYQQLLQAYQ
SLSSIEFNEVALYEQMERLKRPGDPLSHREALVQRLALVNLDTTSILNDVAYYDASLEKL
IKQFQKMHGLQPDGVIGPQTMKWLNTSVTERLALLALNAERIRLWPTQQDSMIVVNVPGF
DMKYWDAGREVFEAKVVVGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVEDILPMVKRDS
EYLANHRMEIIRGWSDPEVIDPALIDWETVEPETFPYRLRQQAGVQNALGTYKFNTPNSR
AIYLHDTPSKHLFNNASRAFSSGCIRVENAEKFAQTLLANQGITLDDFPVSTQAIALKKR
IPVHIIYQTVWYEEGVLHYRDDIYHYDALALGNGDASPNLTKI
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagccgagtcgttgccgctatcgcattgttattctttgttattccgtgttctgcc
acccagcgttttgttgaattggggtggattgatagcacttcgccggtcaatgaacagatc
accaacccggctttggttgagcaaatctatcacagtaataatgatcagttactgtggagc
gatcttgccacggcgaaccattttgaagctcagcttgaggtgattcaccgtgcgagtttc
agtcctttgtttagccgacaacttttcgcgctcaaaagctatcgtcagcaagatagatgg
catgagtatgatgtgttagcgaccgacactttactgcaatacctcagctatgctgagcag
gcaccaaaaatcggtattgcttggttttttgaaggtcaacttgatcaacctcttgctccg
ccgagtgaagaggcgcaactggctttgcatatggcgatcggtaaccagtcgctcgctcgc
ttaatggatgaatacactccacaagaccctgcttatcaacaactgctgcaggcgtatcaa
tcactctcgagcattgagtttaatgaggtggcactatacgagcagatggagcggcttaag
cgtccgggggacccattaagccaccgtgaagctttagtgcagcgtttagctctggtgaat
ctggataccacatccatcttgaatgatgtggcctattacgacgcctcgcttgaaaaactg
atcaagcagtttcagaagatgcatggcttgcagcctgatggcgtgattggcccacaaacc
atgaaatggttgaacacatccgtaactgagcgccttgccttattagcgcttaatgcagag
cggattcgcttatggccaacccagcaagacagcatgattgtggtcaatgtgcccggtttt
gatatgaaatattgggatgccggccgcgaagtctttgaagccaaggtggtggtaggcaaa
accaccagaccgacaccggtgatgaataccaaactcgattcactgatcatcaatccaact
tggaatgtgccgcataaaatcatggtggaagacatcctacccatggtgaaacgtgatagt
gagtatctcgccaatcatcgtatggaaatcattcgtggttggagcgatccagaagtgatt
gatcctgcgctgattgattgggaaaccgttgaaccggaaaccttcccataccgtctgcgc
caacaagcaggcgtgcaaaatgcgcttgggacctataagtttaatacgcccaattcacgc
gctatctatctgcatgatacgccgagcaagcatctgtttaataacgcgtctcgggcgttc
agttctggctgtattcgggtagaaaacgctgaaaagtttgcgcaaaccttgctcgctaat
cagggcattacgctcgacgattttccagtgagcacccaagcgattgcgctcaaaaagcgc
attccagtccacatcatctatcagaccgtgtggtatgaagaaggtgtgctgcattatcgt
gatgatatttatcactatgatgctttagcactcggcaatggtgacgcgtctccaaatttg
actaaaatttga
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